Literature DB >> 20188843

Identifying coral reef fish larvae through DNA barcoding: a test case with the families Acanthuridae and Holocentridae.

Nicolas Hubert1, Erwan Delrieu-Trottin, Jean-Olivier Irisson, Christopher Meyer, Serge Planes.   

Abstract

A reference collection of COI barcode (650 bp) for the Pacific Society Islands has been constituted for 22 species of Acanthuridae and 16 species of Holocentridae. Divergence between congeneric species was on average 20-fold to 87-fold higher than divergence between conspecific sequences and this set of DNA-identifiers was used to identify 40 larvae of both families. All larvae sequenced could be identified to species using DNA-barcodes. Pools of larvae constitute multi-specific assemblages and no additional species compared to adult reef communities were sampled in larval pools, suggesting that the larval assemblages originated from adult communities on neighboring reefs. 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20188843     DOI: 10.1016/j.ympev.2010.02.023

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  21 in total

1.  Using DNA Barcodes to Aid the Identification of Larval Fishes in Tropical Estuarine Waters (Malacca Straits, Malaysia).

Authors:  Cecilia Chu; Kar Hoe Loh; Ching Ching Ng; Ai Lin Ooi; Yoshinobu Konishi; Shih-Pin Huang; Ving Ching Chong
Journal:  Zool Stud       Date:  2019-10-18       Impact factor: 2.058

2.  Next-generation sequencing for rodent barcoding: species identification from fresh, degraded and environmental samples.

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Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

3.  Phylogenetics links monster larva to deep-sea shrimp.

Authors:  Heather D Bracken-Grissom; Darryl L Felder; Nicole L Vollmer; Joel W Martin; Keith A Crandall
Journal:  Ecol Evol       Date:  2012-08-24       Impact factor: 2.912

4.  Using DNA barcoding to assess Caribbean reef fish biodiversity: expanding taxonomic and geographic coverage.

Authors:  Lee A Weigt; Carole C Baldwin; Amy Driskell; David G Smith; Andrea Ormos; Eric A Reyier
Journal:  PLoS One       Date:  2012-07-17       Impact factor: 3.240

5.  Molecular phylogeny of weakfish species of the Stellifer group (Sciaenidae, Perciformes) of the western South Atlantic based on mitochondrial and nuclear data.

Authors:  Andressa Jisely Barreto Barbosa; Iracilda Sampaio; Horacio Schneider; Simoni Santos
Journal:  PLoS One       Date:  2014-07-11       Impact factor: 3.240

6.  Genetic identification of bucktooth parrotfish Sparisoma radians (Valenciennes, 1840) (Labridae, Scarinae) by chromosomal and molecular markers.

Authors:  Fabilene Gomes Paim; José Henrique Souza Galdino Brandão; Iracilda Sampaio; Paulo Roberto Antunes de Mello Affonso; Débora Diniz
Journal:  Genet Mol Biol       Date:  2014-11-14       Impact factor: 1.771

7.  Barcoding life's matrix: translating biodiversity genomics into high school settings to enhance life science education.

Authors:  Linda Santschi; Robert H Hanner; Sujeevan Ratnasingham; Michelle Riconscente; Ralph Imondi
Journal:  PLoS Biol       Date:  2013-01-29       Impact factor: 8.029

8.  Evaluating the accuracy of morphological identification of larval fishes by applying DNA barcoding.

Authors:  Hui-Ling Ko; Yu-Tze Wang; Tai-Sheng Chiu; Ming-An Lee; Ming-Yih Leu; Kuang-Zong Chang; Wen-Yu Chen; Kwang-Tsao Shao
Journal:  PLoS One       Date:  2013-01-31       Impact factor: 3.240

9.  The covert world of fish biofluorescence: a phylogenetically widespread and phenotypically variable phenomenon.

Authors:  John S Sparks; Robert C Schelly; W Leo Smith; Matthew P Davis; Dan Tchernov; Vincent A Pieribone; David F Gruber
Journal:  PLoS One       Date:  2014-01-08       Impact factor: 3.240

10.  Connectivity across the Caribbean Sea: DNA barcoding and morphology unite an enigmatic fish larva from the Florida straits with a new species of sea bass from deep reefs off Curaçao.

Authors:  Carole C Baldwin; G David Johnson
Journal:  PLoS One       Date:  2014-05-13       Impact factor: 3.240

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