Literature DB >> 20177705

Identification of 28 novel mutations in the Bardet-Biedl syndrome genes: the burden of private mutations in an extensively heterogeneous disease.

Jean Muller1, C Stoetzel, M C Vincent, C C Leitch, V Laurier, J M Danse, S Hellé, V Marion, V Bennouna-Greene, S Vicaire, A Megarbane, J Kaplan, V Drouin-Garraud, M Hamdani, S Sigaudy, C Francannet, J Roume, P Bitoun, A Goldenberg, N Philip, S Odent, J Green, M Cossée, E E Davis, N Katsanis, D Bonneau, A Verloes, O Poch, J L Mandel, H Dollfus.   

Abstract

Bardet-Biedl syndrome (BBS), an emblematic disease in the rapidly evolving field of ciliopathies, is characterized by pleiotropic clinical features and extensive genetic heterogeneity. To date, 14 BBS genes have been identified, 3 of which have been found mutated only in a single BBS family each (BBS11/TRIM32, BBS13/MKS1 and BBS14/MKS4/NPHP6). Previous reports of systematic mutation detection in large cohorts of BBS families (n > 90) have dealt only with a single gene, or at most small subsets of the known BBS genes. Here we report extensive analysis of a cohort of 174 BBS families for 12/14 genes, leading to the identification of 28 novel mutations. Two pathogenic mutations in a single gene have been found in 117 families, and a single heterozygous mutation in 17 families (of which 8 involve the BBS1 recurrent mutation, M390R). We confirm that BBS1 and BBS10 are the most frequently mutated genes, followed by BBS12. No mutations have been found in BBS11/TRIM32, the identification of which as a BBS gene only relies on a single missense mutation in a single consanguineous family. While a third variant allele has been observed in a few families, they are in most cases missenses of uncertain pathogenicity, contrasting with the type of mutations observed as two alleles in a single gene. We discuss the various strategies for diagnostic mutation detection, including homozygosity mapping and targeted arrays for the detection of previously reported mutations.

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Year:  2010        PMID: 20177705      PMCID: PMC3638942          DOI: 10.1007/s00439-010-0804-9

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  41 in total

1.  Basal body dysfunction is a likely cause of pleiotropic Bardet-Biedl syndrome.

Authors:  Stephen J Ansley; Jose L Badano; Oliver E Blacque; Josephine Hill; Bethan E Hoskins; Carmen C Leitch; Jun Chul Kim; Alison J Ross; Erica R Eichers; Tanya M Teslovich; Allan K Mah; Robert C Johnsen; John C Cavender; Richard Alan Lewis; Michel R Leroux; Philip L Beales; Nicholas Katsanis
Journal:  Nature       Date:  2003-09-21       Impact factor: 49.962

2.  Mutations in a member of the Ras superfamily of small GTP-binding proteins causes Bardet-Biedl syndrome.

Authors:  Yanli Fan; Muneer A Esmail; Stephen J Ansley; Oliver E Blacque; Keith Boroevich; Alison J Ross; Susan J Moore; Jose L Badano; Helen May-Simera; Deanna S Compton; Jane S Green; Richard Alan Lewis; Mieke M van Haelst; Patrick S Parfrey; David L Baillie; Philip L Beales; Nicholas Katsanis; William S Davidson; Michel R Leroux
Journal:  Nat Genet       Date:  2004-08-15       Impact factor: 38.330

Review 3.  The oligogenic properties of Bardet-Biedl syndrome.

Authors:  Nicholas Katsanis
Journal:  Hum Mol Genet       Date:  2004-02-19       Impact factor: 6.150

4.  Identification of a novel BBS gene (BBS12) highlights the major role of a vertebrate-specific branch of chaperonin-related proteins in Bardet-Biedl syndrome.

Authors:  Corinne Stoetzel; Jean Muller; Virginie Laurier; Erica E Davis; Norann A Zaghloul; Serge Vicaire; Cecile Jacquelin; Frederic Plewniak; Carmen C Leitch; Pierre Sarda; Christian Hamel; Thomy J L de Ravel; Richard Alan Lewis; Evelyne Friederich; Christelle Thibault; Jean-Marc Danse; Alain Verloes; Dominique Bonneau; Nicholas Katsanis; Olivier Poch; Jean-Louis Mandel; Helene Dollfus
Journal:  Am J Hum Genet       Date:  2006-11-15       Impact factor: 11.025

5.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.

Authors:  J D Thompson; D G Higgins; T J Gibson
Journal:  Nucleic Acids Res       Date:  1994-11-11       Impact factor: 16.971

6.  Comparative genomic analysis identifies an ADP-ribosylation factor-like gene as the cause of Bardet-Biedl syndrome (BBS3).

Authors:  Annie P Chiang; Darryl Nishimura; Charles Searby; Khalil Elbedour; Rivka Carmi; Amanda L Ferguson; Jenifer Secrist; Terry Braun; Thomas Casavant; Edwin M Stone; Val C Sheffield
Journal:  Am J Hum Genet       Date:  2004-07-16       Impact factor: 11.025

7.  Comparative genomics identifies a flagellar and basal body proteome that includes the BBS5 human disease gene.

Authors:  Jin Billy Li; Jantje M Gerdes; Courtney J Haycraft; Yanli Fan; Tanya M Teslovich; Helen May-Simera; Haitao Li; Oliver E Blacque; Linya Li; Carmen C Leitch; Richard Allan Lewis; Jane S Green; Patrick S Parfrey; Michel R Leroux; William S Davidson; Philip L Beales; Lisa M Guay-Woodford; Bradley K Yoder; Gary D Stormo; Nicholas Katsanis; Susan K Dutcher
Journal:  Cell       Date:  2004-05-14       Impact factor: 41.582

8.  Identification of the gene (BBS1) most commonly involved in Bardet-Biedl syndrome, a complex human obesity syndrome.

Authors:  Kirk Mykytyn; Darryl Y Nishimura; Charles C Searby; Mythreyi Shastri; Hsan-jan Yen; John S Beck; Terry Braun; Luan M Streb; Alberto S Cornier; Gerald F Cox; Anne B Fulton; Rivka Carmi; Güven Lüleci; Settara C Chandrasekharappa; Francis S Collins; Samuel G Jacobson; John R Heckenlively; Richard G Weleber; Edwin M Stone; Val C Sheffield
Journal:  Nat Genet       Date:  2002-07-15       Impact factor: 38.330

9.  Identification of a novel Bardet-Biedl syndrome protein, BBS7, that shares structural features with BBS1 and BBS2.

Authors:  José L Badano; Stephen J Ansley; Carmen C Leitch; Richard Alan Lewis; James R Lupski; Nicholas Katsanis
Journal:  Am J Hum Genet       Date:  2003-02-03       Impact factor: 11.025

10.  Evaluation of complex inheritance involving the most common Bardet-Biedl syndrome locus (BBS1).

Authors:  Kirk Mykytyn; Darryl Y Nishimura; Charles C Searby; Gretel Beck; Kevin Bugge; Heidi L Haines; Alberto S Cornier; Gerald F Cox; Anne B Fulton; Rivka Carmi; Alessandro Iannaccone; Samuel G Jacobson; Richard G Weleber; Alan F Wright; Ruth Riise; Raoul C M Hennekam; Güven Lüleci; Sibel Berker-Karauzum; Leslie G Biesecker; Edwin M Stone; Val C Sheffield
Journal:  Am J Hum Genet       Date:  2003-01-10       Impact factor: 11.025

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  57 in total

1.  In search of triallelism in Bardet-Biedl syndrome.

Authors:  Leen Abu-Safieh; Shamsa Al-Anazi; Lama Al-Abdi; Mais Hashem; Hisham Alkuraya; Mushari Alamr; Mugtaba O Sirelkhatim; Zuhair Al-Hassnan; Basim Alkuraya; Jawahir Y Mohamed; Ahmad Al-Salem; May Alrashed; Eissa Faqeih; Ameen Softah; Amal Al-Hashem; Sami Wali; Zuhair Rahbeeni; Moeen Alsayed; Arif O Khan; Lihadh Al-Gazali; Peter E M Taschner; Selwa Al-Hazzaa; Fowzan S Alkuraya
Journal:  Eur J Hum Genet       Date:  2012-02-22       Impact factor: 4.246

2.  The Ran importin system in cilia trafficking.

Authors:  Shuling Fan; Ben Margolis
Journal:  Organogenesis       Date:  2011-07-01       Impact factor: 2.500

3.  Combining fetal sonography with genetic and allele pathogenicity studies to secure a neonatal diagnosis of Bardet-Biedl syndrome.

Authors:  E Ashkinadze; T Rosen; S S Brooks; N Katsanis; E E Davis
Journal:  Clin Genet       Date:  2012-10-14       Impact factor: 4.438

4.  Tripartite motif ligases catalyze polyubiquitin chain formation through a cooperative allosteric mechanism.

Authors:  Frederick C Streich; Virginia P Ronchi; J Patrick Connick; Arthur L Haas
Journal:  J Biol Chem       Date:  2013-02-13       Impact factor: 5.157

5.  Interaction with the Bardet-Biedl gene product TRIM32/BBS11 modifies the half-life and localization of Glis2/NPHP7.

Authors:  Haribaskar Ramachandran; Tobias Schäfer; Yunhee Kim; Konstantin Herfurth; Sylvia Hoff; Soeren S Lienkamp; Albrecht Kramer-Zucker; Gerd Walz
Journal:  J Biol Chem       Date:  2014-02-05       Impact factor: 5.157

6.  Mutation profile of BBS genes in Iranian patients with Bardet-Biedl syndrome: genetic characterization and report of nine novel mutations in five BBS genes.

Authors:  Zohreh Fattahi; Parvin Rostami; Amin Najmabadi; Marzieh Mohseni; Kimia Kahrizi; Mohammad Reza Akbari; Ariana Kariminejad; Hossein Najmabadi
Journal:  J Hum Genet       Date:  2014-05-22       Impact factor: 3.172

7.  Mutation analysis in Bardet-Biedl syndrome by DNA pooling and massively parallel resequencing in 105 individuals.

Authors:  Sabine Janssen; Gokul Ramaswami; Erica E Davis; Toby Hurd; Rannar Airik; Jennifer M Kasanuki; Lauren Van Der Kraak; Susan J Allen; Philip L Beales; Nicholas Katsanis; Edgar A Otto; Friedhelm Hildebrandt
Journal:  Hum Genet       Date:  2010-10-30       Impact factor: 4.132

Review 8.  Bardet-Biedl Syndrome.

Authors:  Evgeny N Suspitsin; Evgeny N Imyanitov
Journal:  Mol Syndromol       Date:  2016-04-15

9.  Differential effects on β-cell mass by disruption of Bardet-Biedl syndrome or Alstrom syndrome genes.

Authors:  Sukanya Lodh; Timothy L Hostelley; Carmen C Leitch; Elizabeth A O'Hare; Norann A Zaghloul
Journal:  Hum Mol Genet       Date:  2015-10-22       Impact factor: 6.150

10.  Genomic insights into early-onset obesity.

Authors:  Hélène Choquet; David Meyre
Journal:  Genome Med       Date:  2010-06-23       Impact factor: 11.117

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