Literature DB >> 20163096

Mechanism of the hydride transfer between Anabaena Tyr303Ser FNR(rd)/FNR(ox) and NADP+/H. A combined pre-steady-state kinetic/ensemble-averaged transition-state theory with multidimensional tunneling study.

Isaias Lans1, José Ramón Peregrina, Milagros Medina, Mireia Garcia-Viloca, Angels González-Lafont, José M Lluch.   

Abstract

The flavoenzyme ferredoxin-NADP(+) reductase (FNR) catalyzes the production of NADPH during photosynthesis. The hydride-transfer reactions between the Anabaena mutant Tyr303Ser FNR(rd)/FNR(ox) and NADP(+)/H have been studied both experimentally and theoretically. Stopped-flow pre-steady-state kinetic measurements have shown that, in contrast to that observed for WT FNR, the physiological hydride transfer from Tyr303Ser FNR(rd) to NADP(+) does not occur. Conversely, the reverse reaction does take place with a rate constant just slightly slower than for WT FNR. This latter process shows temperature-dependent rates, but essentially temperature independent kinetic isotope effects, suggesting the reaction takes place following the vibration-driven tunneling model. In turn, ensemble-averaged variational transition-state theory with multidimensional tunneling calculations provide reaction rate constant values and kinetic isotope effects that agree with the experimental results, the experimental and the theoretical values for the reverse process being noticeably similar. The reaction mechanism behind these hydride transfers has been analyzed. The formation of a close contact ionic pair FADH(-):NADP(+) surrounded by the polar environment of the enzyme in the reactant complex of the mutant might be the cause of the huge difference between the direct and the reverse reaction.

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Year:  2010        PMID: 20163096     DOI: 10.1021/jp912034m

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  10 in total

1.  High-resolution studies of hydride transfer in the ferredoxin:NADP+ reductase superfamily.

Authors:  Kelsey M Kean; Russell A Carpenter; Vittorio Pandini; Giuliana Zanetti; Andrea R Hall; Rick Faber; Alessandro Aliverti; P Andrew Karplus
Journal:  FEBS J       Date:  2017-08-29       Impact factor: 5.542

Review 2.  Interaction and electron transfer between ferredoxin-NADP+ oxidoreductase and its partners: structural, functional, and physiological implications.

Authors:  Paula Mulo; Milagros Medina
Journal:  Photosynth Res       Date:  2017-03-30       Impact factor: 3.573

3.  The transient catalytically competent coenzyme allocation into the active site of Anabaena ferredoxin NADP+ -reductase.

Authors:  José Ramón Peregrina; Isaías Lans; Milagros Medina
Journal:  Eur Biophys J       Date:  2011-05-03       Impact factor: 1.733

4.  Temperature dependence of the kinetic isotope effects in thymidylate synthase. A theoretical study.

Authors:  Natalia Kanaan; Silvia Ferrer; Sergio Martí; Mireia Garcia-Viloca; Amnon Kohen; Vicent Moliner
Journal:  J Am Chem Soc       Date:  2011-04-08       Impact factor: 15.419

5.  C-terminal residues of ferredoxin-NAD(P)+ reductase from Chlorobaculum tepidum are responsible for reaction dynamics in the hydride transfer and redox equilibria with NADP+/NADPH.

Authors:  Daisuke Seo; Tomoya Asano
Journal:  Photosynth Res       Date:  2017-11-08       Impact factor: 3.573

Review 6.  The importance of ensemble averaging in enzyme kinetics.

Authors:  Laura Masgrau; Donald G Truhlar
Journal:  Acc Chem Res       Date:  2014-12-24       Impact factor: 22.384

7.  A STD-NMR study of the interaction of the Anabaena ferredoxin-NADP+ reductase with the coenzyme.

Authors:  Lara V Antonini; José R Peregrina; Jesús Angulo; Milagros Medina; Pedro M Nieto
Journal:  Molecules       Date:  2014-01-07       Impact factor: 4.411

8.  W196 and the β-Hairpin Motif Modulate the Redox Switch of Conformation and the Biomolecular Interaction Network of the Apoptosis-Inducing Factor.

Authors:  Silvia Romero-Tamayo; Ruben Laplaza; Adrian Velazquez-Campoy; Raquel Villanueva; Milagros Medina; Patricia Ferreira
Journal:  Oxid Med Cell Longev       Date:  2021-01-15       Impact factor: 6.543

9.  Redox proteins of hydroxylating bacterial dioxygenases establish a regulatory cascade that prevents gratuitous induction of tetralin biodegradation genes.

Authors:  Laura Ledesma-García; Ana Sánchez-Azqueta; Milagros Medina; Francisca Reyes-Ramírez; Eduardo Santero
Journal:  Sci Rep       Date:  2016-03-31       Impact factor: 4.379

10.  Nanomechanical Study of Enzyme: Coenzyme Complexes: Bipartite Sites in Plastidic Ferredoxin-NADP+ Reductase for the Interaction with NADP.

Authors:  Sandra Pérez-Domínguez; Silvia Caballero-Mancebo; Carlos Marcuello; Marta Martínez-Júlvez; Milagros Medina; Anabel Lostao
Journal:  Antioxidants (Basel)       Date:  2022-03-11
  10 in total

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