Literature DB >> 20161345

Mapping of Sample Collection Data: GIS Tools for the Natural Product Researcher.

Nicholas H Oberlies1, James I Rineer, Feras Q Alali, Khaled Tawaha, Joseph O Falkinham, William D Wheaton.   

Abstract

Scientists engaged in the research of natural products often either conduct field collections themselves or collaborate with partners who do, such as botanists, mycologists, or SCUBA divers. The information gleaned from such collecting trips (e.g. longitude/latitude coordinates, geography, elevation, and a multitude of other field observations) have provided valuable data to the scientific community (e.g., biodiversity), even if it is tangential to the direct aims of the natural products research, which are often focused on drug discovery and/or chemical ecology. Geographic Information Systems (GIS) have been used to display, manage, and analyze geographic data, including collection sites for natural products. However, to the uninitiated, these tools are often beyond the financial and/or computational means of the natural product scientist. With new, free, and easy-to-use geospatial visualization tools, such as Google Earth, mapping and geographic imaging of sampling data are now within the reach of natural products scientists. The goals of the present study were to develop simple tools that are tailored for the natural products setting, thereby presenting a means to map such information, particularly via open source software like Google Earth.

Entities:  

Year:  2009        PMID: 20161345      PMCID: PMC2774915          DOI: 10.1016/j.phytol.2008.10.006

Source DB:  PubMed          Journal:  Phytochem Lett        ISSN: 1874-3900            Impact factor:   1.679


  6 in total

1.  The diversity and biogeography of soil bacterial communities.

Authors:  Noah Fierer; Robert B Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-09       Impact factor: 11.205

2.  Microbial-mediated release of bisphenol A from polycarbonate vessels.

Authors:  N H Oberlies; C Li; R J McGivney; F Q Alali; J R Tanner; J O Falkinham
Journal:  Lett Appl Microbiol       Date:  2007-12-07       Impact factor: 2.858

3.  New colchicinoids from a native Jordanian meadow saffron, colchicum brachyphyllum: isolation of the first naturally occurring dextrorotatory colchicinoid.

Authors:  Feras Q Alali; Tamam El-Elimat; Chen Li; Amjad Qandil; Ahmad Alkofahi; Khaled Tawaha; Jason P Burgess; Yuka Nakanishi; David J Kroll; Hernán A Navarro; Joseph O Falkinham; Mansukh C Wani; Nicholas H Oberlies
Journal:  J Nat Prod       Date:  2005-02       Impact factor: 4.050

4.  Antioxidant activity and total phenolic content of aqueous and methanolic extracts of Jordanian plants: an ICBG project.

Authors:  Feras Q Alali; Khaled Tawaha; Tamam El-Elimat; Maha Syouf; Mosa El-Fayad; Khaled Abulaila; Samara Joy Nielsen; William D Wheaton; Joseph O Falkinham; Nicholas H Oberlies
Journal:  Nat Prod Res       Date:  2007-10       Impact factor: 2.861

5.  Colchicinoids from Colchicum crocifolium Boiss.: a case study in dereplication strategies for (-)-colchicine and related analogues using LC-MS and LC-PDA techniques.

Authors:  Feras Q Alali; Ahmad Gharaibeh; Abdullah Ghawanmeh; Khaled Tawaha; Nicholas H Oberlies
Journal:  Phytochem Anal       Date:  2008 Sep-Oct       Impact factor: 3.373

6.  Global trends in emerging infectious diseases.

Authors:  Kate E Jones; Nikkita G Patel; Marc A Levy; Adam Storeygard; Deborah Balk; John L Gittleman; Peter Daszak
Journal:  Nature       Date:  2008-02-21       Impact factor: 49.962

  6 in total
  2 in total

1.  Proliferation of antibiotic-producing bacteria and concomitant antibiotic production as the basis for the antibiotic activity of Jordan's red soils.

Authors:  Joseph O Falkinham; Thomas E Wall; Justin R Tanner; Khaled Tawaha; Feras Q Alali; Chen Li; Nicholas H Oberlies
Journal:  Appl Environ Microbiol       Date:  2009-03-13       Impact factor: 4.792

2.  A spatially explicit model of functional connectivity for the endangered Przewalski's gazelle (Procapra przewalskii) in a patchy landscape.

Authors:  Chunlin Li; Zhigang Jiang; Hongxia Fang; Chunwang Li
Journal:  PLoS One       Date:  2013-11-08       Impact factor: 3.240

  2 in total

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