Literature DB >> 20161336

Non-iterative sampling-based Bayesian methods for identifying changepoints in the sequence of cases of haemolytic uraemic syndrome.

Guo-Liang Tian1, Kai Wang Ng, Kai-Can Li, Ming Tan.   

Abstract

Diarrhoea-associated Haemolytic uraemic syndrome (HUS) is a disease that affects the kidneys and other organs. Motivated by the annual number of cases of HUS collected in Birmingham and Newcastle of England, respectively, from 1970 to 1989, we consider Bayesian changepoint analysis with specific attention to Poisson changepoint models. For changepoint models with unknown number of changepoints, we propose a new non-iterative Bayesian sampling approach (called exact IBF sampling), which completely avoids the problem of convergence and slow convergence associated with iterative Markov chain Monte Carlo (MCMC) methods. The idea is to first utilize the sampling inverse Bayes formula (IBF) to derive the conditional distribution of the latent data given the observed data, and then to draw iid samples from the complete-data posterior distribution. For the purpose of selecting the appropriate model (or determining the number of changepoints), we develop two alternative formulae to exactly calculate marginal likelihood (or Bayes factor) by using the exact IBF output and the point-wise IBF, respectively. The HUS data are re-analyzed using the proposed methods. Simulations are implemented to validate the performance of the proposed methods.

Entities:  

Year:  2009        PMID: 20161336      PMCID: PMC2678871          DOI: 10.1016/j.csda.2009.02.006

Source DB:  PubMed          Journal:  Comput Stat Data Anal        ISSN: 0167-9473            Impact factor:   1.681


  3 in total

1.  Minimally selected p and other tests for a single abrupt changepoint in a binary sequence.

Authors:  A L Halpern
Journal:  Biometrics       Date:  1999-12       Impact factor: 2.571

2.  The increasing incidence of the hemolytic-uremic syndrome in King County, Washington: lack of evidence for ascertainment bias.

Authors:  P I Tarr; M A Neill; J Allen; C J Siccardi; S L Watkins; R O Hickman
Journal:  Am J Epidemiol       Date:  1989-03       Impact factor: 4.897

3.  Haemolytic uraemic syndromes in the British Isles 1985-8: association with verocytotoxin producing Escherichia coli. Part 1: Clinical and epidemiological aspects.

Authors:  D V Milford; C M Taylor; B Guttridge; S M Hall; B Rowe; H Kleanthous
Journal:  Arch Dis Child       Date:  1990-07       Impact factor: 3.791

  3 in total

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