Literature DB >> 20148974

A reason for overlap peaks in direct sequencing of rRNA gene ITS in Pleurotus nebrodensis.

Chenyang Huang1, Jingyu Xu, Wei Gao, Qiang Chen, Hexiang Wang, Jinxia Zhang.   

Abstract

To examine why we failed in direct sequencing of rRNA gene internal transcribed spacer (ITS) in Pleurotus nebrodensis, we obtained monokaryons of P. nebrodensis (00489 and 00491) using a protoplast monokaryonization technique. PCR products of ITS amplifications were sequenced. There was a base pair insertion/deletion difference between the two nuclei of P. nebrodensis that led to failure in direct sequencing.

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Year:  2010        PMID: 20148974     DOI: 10.1111/j.1574-6968.2010.01891.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  4 in total

1.  Comprehensive Genetic Analysis of Monokaryon and Dikaryon Populations Provides Insight Into Cross-Breeding of Flammulina filiformis.

Authors:  Hui Li; Lei Shi; Weiqi Tang; Weiwei Xia; Yingli Zhong; Xinyu Xu; Baogui Xie; Yongxin Tao
Journal:  Front Microbiol       Date:  2022-07-05       Impact factor: 6.064

2.  Intra- and inter-isolate variation of ribosomal and protein-coding genes in Pleurotus: implications for molecular identification and phylogeny on fungal groups.

Authors:  Xiao-Lan He; Qian Li; Wei-Hong Peng; Jie Zhou; Xue-Lian Cao; Di Wang; Zhong-Qian Huang; Wei Tan; Yu Li; Bing-Cheng Gan
Journal:  BMC Microbiol       Date:  2017-06-26       Impact factor: 3.605

3.  Early Ongoing Speciation of Ogataea uvarum Sp. Nov. Within the Grape Ecosystem Revealed by the Internal Variability Among the rDNA Operon Repeats.

Authors:  Luca Roscini; Mariana Tristezza; Laura Corte; Claudia Colabella; Carla Perrotta; Patrizia Rampino; Vincent Robert; Duong Vu; Gianluigi Cardinali; Francesco Grieco
Journal:  Front Microbiol       Date:  2018-08-03       Impact factor: 5.640

4.  Employing 454 amplicon pyrosequencing to reveal intragenomic divergence in the internal transcribed spacer rDNA region in fungi.

Authors:  Daniel L Lindner; Tor Carlsen; R Henrik Nilsson; Marie Davey; Trond Schumacher; Håvard Kauserud
Journal:  Ecol Evol       Date:  2013-05-08       Impact factor: 2.912

  4 in total

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