Literature DB >> 20148190

On large margin hierarchical classification with multiple paths.

Junhui Wang1, Xiaotong Shen, Wei Pan.   

Abstract

Hierarchical classification is critical to knowledge management and exploration, as in gene function prediction and document categorization. In hierarchical classification, an input is classified according to a structured hierarchy. In a situation as such, the central issue is how to effectively utilize the inter-class relationship to improve the generalization performance of flat classification ignoring such dependency. In this article, we propose a novel large margin method through constraints characterizing a multi-path hierarchy, where class membership can be non-exclusive. The proposed method permits a treatment of various losses for hierarchical classification. For implementation, we focus on the symmetric difference loss and two large margin classifiers: support vector machines and psi-learning. Finally, theoretical and numerical analyses are conducted, in addition to an application to gene function prediction. They suggest that the proposed method achieves the desired objective and outperforms strong competitors in the literature.

Entities:  

Year:  2009        PMID: 20148190      PMCID: PMC2818027          DOI: 10.1198/jasa.2009.tm08084

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  8 in total

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Authors:  Alex J. Smola; Bernhard Schölkopf; Klaus Robert Müller
Journal:  Neural Netw       Date:  1998-06

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Authors:  Guanghua Xiao; Wei Pan
Journal:  J Bioinform Comput Biol       Date:  2005-12       Impact factor: 1.122

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Authors:  H W Mewes; K Albermann; K Heumann; S Liebl; F Pfeiffer
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Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

8.  Transitive functional annotation by shortest-path analysis of gene expression data.

Authors:  Xianghong Zhou; Ming-Chih J Kao; Wing Hung Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-26       Impact factor: 11.205

  8 in total
  1 in total

1.  Precision Medicine.

Authors:  Michael R Kosorok; Eric B Laber
Journal:  Annu Rev Stat Appl       Date:  2019-03       Impact factor: 5.810

  1 in total

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