Literature DB >> 20147154

Computational docking of biomolecular complexes with AutoDock.

David S Goodsell.   

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Year:  2009        PMID: 20147154     DOI: 10.1101/pdb.prot5200

Source DB:  PubMed          Journal:  Cold Spring Harb Protoc        ISSN: 1559-6095


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  12 in total

1.  Molecular insight into substrate recognition and catalysis of Baeyer-Villiger monooxygenase MtmOIV, the key frame-modifying enzyme in the biosynthesis of anticancer agent mithramycin.

Authors:  Mary A Bosserman; Theresa Downey; Nicholas Noinaj; Susan K Buchanan; Jürgen Rohr
Journal:  ACS Chem Biol       Date:  2013-09-13       Impact factor: 5.100

2.  Binding site and affinity prediction of general anesthetics to protein targets using docking.

Authors:  Renyu Liu; Jose Manuel Perez-Aguilar; David Liang; Jeffery G Saven
Journal:  Anesth Analg       Date:  2012-03-05       Impact factor: 5.108

Review 3.  Physiologically based pharmacokinetic models: integration of in silico approaches with micro cell culture analogues.

Authors:  A Chen; M L Yarmush; T Maguire
Journal:  Curr Drug Metab       Date:  2012-07       Impact factor: 3.731

4.  Palmitic acid analogs exhibit nanomolar binding affinity for the HIV-1 CD4 receptor and nanomolar inhibition of gp120-to-CD4 fusion.

Authors:  Elena E Paskaleva; Jing Xue; David Y-W Lee; Alexander Shekhtman; Mario Canki
Journal:  PLoS One       Date:  2010-08-13       Impact factor: 3.240

5.  Apigenin Attenuates Atherogenesis through Inducing Macrophage Apoptosis via Inhibition of AKT Ser473 Phosphorylation and Downregulation of Plasminogen Activator Inhibitor-2.

Authors:  Ping Zeng; Bin Liu; Qun Wang; Qin Fan; Jian-Xin Diao; Jing Tang; Xiu-Qiong Fu; Xue-Gang Sun
Journal:  Oxid Med Cell Longev       Date:  2015-04-15       Impact factor: 6.543

6.  Biophysical Insight into the Interaction of Human Lysozyme with Anticancer Drug Anastrozole: A Multitechnique Approach.

Authors:  Fahad M Almutairi; Mohammad Rehan Ajmal; Adel Ibrahim Al Alawy; Rizwan Hasan Khan; Ali Saber Abdelhameed
Journal:  ScientificWorldJournal       Date:  2020-08-25

7.  Molecular Docking and Interaction Studies of Identified Abscisic Acid Receptors in Oryza sativa: An In-Silico Perspective on Comprehending Stress Tolerance Mechanisms.

Authors:  Vidya Niranjan; Amulya Rao; B Janaki; Akshay Uttarkar; Anagha S Setlur; K Chandrashekar; M Udayakumar
Journal:  Curr Genomics       Date:  2021-12-31       Impact factor: 2.689

8.  Molecular interaction of Survivin and Piperine by computational docking analyses for neuroblastoma targeting.

Authors:  V Muthukumar; A J Vanisree
Journal:  Ann Neurosci       Date:  2011-10

9.  PL-PatchSurfer: a novel molecular local surface-based method for exploring protein-ligand interactions.

Authors:  Bingjie Hu; Xiaolei Zhu; Lyman Monroe; Mark G Bures; Daisuke Kihara
Journal:  Int J Mol Sci       Date:  2014-08-27       Impact factor: 5.923

10.  In Vivo, Proteomic, and In Silico Investigation of Sapodilla for Therapeutic Potential in Gastrointestinal Disorders.

Authors:  Sameen Fatima Ansari; Arif-Ullah Khan; Neelum Gul Qazi; Fawad Ali Shah; Komal Naeem
Journal:  Biomed Res Int       Date:  2019-12-10       Impact factor: 3.411

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