Literature DB >> 20133484

Integrating human and rodent data to identify the genetic factors involved in chronic kidney disease.

Michael R Garrett1, Marcus G Pezzolesi, Ron Korstanje.   

Abstract

The increasing numbers of patients with chronic kidney disease combined with no satisfying interventions for preventing or curing the disease emphasize the need to better understand the genes involved in the initiation and progression of complex renal diseases, their interactions with other host genes, and the environment. Linkage and association studies in human, rat, and mouse have been successful in identifying genetic loci for various disease-related phenotypes but have thus far not been very successful identifying underlying genes. The purpose of this review is to summarize the progress in human, rat, and mouse genetic studies to show the concordance between the loci among the different species. The collective utilization of human and nonhuman mammalian datasets and resources can lead to a more rapid narrowing of disease loci and the subsequent identification of candidate genes. In addition, genes identified through these methods can be further characterized and investigated for interactions using animal models, which is not possible in humans.

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Year:  2010        PMID: 20133484      PMCID: PMC4473253          DOI: 10.1681/ASN.2009080881

Source DB:  PubMed          Journal:  J Am Soc Nephrol        ISSN: 1046-6673            Impact factor:   10.121


  60 in total

1.  A locus for an autosomal dominant form of progressive renal failure and hypertension at chromosome 1q21.

Authors:  D H Cohn; T Shohat; M Yahav; T Ilan; G Rechavi; L King; M Shohat
Journal:  Am J Hum Genet       Date:  2000-08-04       Impact factor: 11.025

2.  Genetic isolation of a chromosome 1 region affecting susceptibility to hypertension-induced renal damage in the spontaneously hypertensive rat.

Authors:  E St Lezin; K A Griffin; M Picken; M C Churchill; P C Churchill; T W Kurtz; W Liu; N Wang; V Kren; V Zidek; M Pravenec; A K Bidani
Journal:  Hypertension       Date:  1999-08       Impact factor: 10.190

3.  NPHS2, encoding the glomerular protein podocin, is mutated in autosomal recessive steroid-resistant nephrotic syndrome.

Authors:  N Boute; O Gribouval; S Roselli; F Benessy; H Lee; A Fuchshuber; K Dahan; M C Gubler; P Niaudet; C Antignac
Journal:  Nat Genet       Date:  2000-04       Impact factor: 38.330

4.  Familial clustering of diabetic kidney disease. Evidence for genetic susceptibility to diabetic nephropathy.

Authors:  E R Seaquist; F C Goetz; S Rich; J Barbosa
Journal:  N Engl J Med       Date:  1989-05-04       Impact factor: 91.245

5.  Genetic variations in the gene encoding ELMO1 are associated with susceptibility to diabetic nephropathy.

Authors:  Atsuyuki Shimazaki; Yoshihiro Kawamura; Akio Kanazawa; Akihiro Sekine; Susumu Saito; Tatsuhiko Tsunoda; Daisuke Koya; Tetsuya Babazono; Yasushi Tanaka; Masafumi Matsuda; Koichi Kawai; Tomohiro Iiizumi; Masahito Imanishi; Toshihiro Shinosaki; Toru Yanagimoto; Minoru Ikeda; Shigeki Omachi; Atsunori Kashiwagi; Kohei Kaku; Yasuhiko Iwamoto; Ryuzou Kawamori; Ryuichi Kikkawa; Masatoshi Nakajima; Yusuke Nakamura; Shiro Maeda
Journal:  Diabetes       Date:  2005-04       Impact factor: 9.461

6.  Polygenic control of susceptibility to murine systemic lupus erythematosus.

Authors:  L Morel; U H Rudofsky; J A Longmate; J Schiffenbauer; E K Wakeland
Journal:  Immunity       Date:  1994-06       Impact factor: 31.745

7.  Proteinuria and glomerulosclerosis in the Sabra genetic rat model of salt susceptibility.

Authors:  Chana Yagil; Marina Sapojnikov; Gurion Katni; Zvi Ilan; Sarah Weksler Zangen; Eliezer Rosenmann; Yoram Yagil
Journal:  Physiol Genomics       Date:  2002-04-23       Impact factor: 3.107

8.  Dissection of a genetic locus influencing renal function in the rat and its concordance with kidney disease loci on human chromosome 1q21.

Authors:  Michael R Garrett; William T Gunning; Tracy Radecki; Arti Richard
Journal:  Physiol Genomics       Date:  2007-05-15       Impact factor: 3.107

9.  Renal vascular and tubulointerstitial inflammation and proliferation in Cyp1a1-Ren2 transgenic rats with inducible ANG II-dependent malignant hypertension.

Authors:  Miguel L Graciano; Cynthia R Mouton; Matthew E Patterson; Dale M Seth; John J Mullins; Kenneth D Mitchell
Journal:  Am J Physiol Renal Physiol       Date:  2007-03-06

10.  Integrated transcriptional profiling and linkage analysis for identification of genes underlying disease.

Authors:  Norbert Hubner; Caroline A Wallace; Heike Zimdahl; Enrico Petretto; Herbert Schulz; Fiona Maciver; Michael Mueller; Oliver Hummel; Jan Monti; Vaclav Zidek; Alena Musilova; Vladimir Kren; Helen Causton; Laurence Game; Gabriele Born; Sabine Schmidt; Anita Müller; Stuart A Cook; Theodore W Kurtz; John Whittaker; Michal Pravenec; Timothy J Aitman
Journal:  Nat Genet       Date:  2005-02-13       Impact factor: 38.330

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  19 in total

1.  Uncovering genes and regulatory pathways related to urinary albumin excretion.

Authors:  Rachael S Hageman; Magalie S Leduc; Christina R Caputo; Shirng-Wern Tsaih; Gary A Churchill; Ron Korstanje
Journal:  J Am Soc Nephrol       Date:  2010-10-28       Impact factor: 10.121

2.  TGF-alpha mediates genetic susceptibility to chronic kidney disease.

Authors:  Denise Laouari; Martine Burtin; Aurélie Phelep; Carla Martino; Evangeline Pillebout; Xavier Montagutelli; Gérard Friedlander; Fabiola Terzi
Journal:  J Am Soc Nephrol       Date:  2010-12-23       Impact factor: 10.121

3.  Renal rescue of dopamine D2 receptor function reverses renal injury and high blood pressure.

Authors:  Prasad R Konkalmatt; Laureano D Asico; Yanrong Zhang; Yu Yang; Cinthia Drachenberg; Xiaoxu Zheng; Fei Han; Pedro A Jose; Ines Armando
Journal:  JCI Insight       Date:  2016-06-02

Review 4.  Using Genetic and Species Diversity to Tackle Kidney Disease.

Authors:  Michael R Garrett; Ron Korstanje
Journal:  Trends Genet       Date:  2020-04-30       Impact factor: 11.639

5.  Human Urine-Derived Renal Progenitors for Personalized Modeling of Genetic Kidney Disorders.

Authors:  Elena Lazzeri; Elisa Ronconi; Maria Lucia Angelotti; Anna Peired; Benedetta Mazzinghi; Francesca Becherucci; Sara Conti; Giulia Sansavini; Alessandro Sisti; Fiammetta Ravaglia; Duccio Lombardi; Aldesia Provenzano; Anna Manonelles; Josep M Cruzado; Sabrina Giglio; Rosa Maria Roperto; Marco Materassi; Laura Lasagni; Paola Romagnani
Journal:  J Am Soc Nephrol       Date:  2015-01-07       Impact factor: 10.121

Review 6.  Mice as a mammalian model for research on the genetics of aging.

Authors:  Rong Yuan; Luanne L Peters; Beverly Paigen
Journal:  ILAR J       Date:  2011

7.  Genome-wide identification of long noncoding RNAs in rat models of cardiovascular and renal disease.

Authors:  Kathirvel Gopalakrishnan; Sivarajan Kumarasamy; Blair Mell; Bina Joe
Journal:  Hypertension       Date:  2014-11-10       Impact factor: 10.190

8.  Sequence variation at multiple loci influences red cell hemoglobin concentration.

Authors:  Luanne L Peters; Jordan A Shavit; Amy J Lambert; Shirng-Wern Tsaih; Qian Li; Zhiguang Su; Magalie S Leduc; Beverly Paigen; Gary A Churchill; David Ginsburg; Carlo Brugnara
Journal:  Blood       Date:  2010-09-10       Impact factor: 22.113

9.  MiR-217 mediates the protective effects of the dopamine D2 receptor on fibrosis in human renal proximal tubule cells.

Authors:  Fei Han; Prasad Konkalmatt; Jianghua Chen; John Gildea; Robin A Felder; Pedro A Jose; Ines Armando
Journal:  Hypertension       Date:  2015-03-23       Impact factor: 10.190

10.  Genetic analysis of albuminuria in collaborative cross and multiple mouse intercross populations.

Authors:  Jill Thaisz; Shirng-Wern Tsaih; Minjie Feng; Vivek M Philip; Yunyu Zhang; Liane Yanas; Susan Sheehan; Lingfei Xu; Darla R Miller; Beverly Paigen; Elissa J Chesler; Gary A Churchill; Keith Dipetrillo
Journal:  Am J Physiol Renal Physiol       Date:  2012-08-01
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