Literature DB >> 20131895

Interplay between theory and experiment: computational organometallic and transition metal chemistry.

Zhenyang Lin1.   

Abstract

Computational and theoretical chemistry provide fundamental insights into the structures, properties, and reactivities of molecules. As a result, theoretical calculations have become indispensable in various fields of chemical research and development. In this Account, we present our research in the area of computational transition metal chemistry, using examples to illustrate how theory impacts our understanding of experimental results and how close collaboration between theoreticians and experimental chemists can be mutually beneficial. We begin by examining the use of computational chemistry to elucidate the details of some unusual chemical bonds. We consider the three-center, two-electron bonding in titanocene sigma-borane complexes and the five-center, four-electron bonding in a rhodium-bismuth complex. The bonding in metallabenzene complexes is also examined. In each case, theoretical calculations provide particular insight into the electronic structure of the chemical bonds. We then give an example of how theoretical calculations aided the structural determination of a kappa(2)-N,N chelate ruthenium complex formed upon heating an intermediate benzonitrile-coordinated complex. An initial X-ray diffraction structure proposed on the basis of a reasonable mechanism appeared to fit well, with an apparently acceptable R value of 0.0478. But when DFT calculations were applied, the optimized geometry differed significantly from the experimental data. By combining experimental and theoretical outlooks, we posited a new structure. Remarkably, a re-refining of the X-ray diffraction data based on the new structure resulted in a slightly lower R value of 0.0453. We further examine the use of computational chemistry in providing new insight into C-H bond activation mechanisms and in understanding the reactivity properties of nucleophilic boryl ligands, addressing experimental difficulties with calculations and vice versa. Finally, we consider the impact of theoretical insights in three very specific experimental studies of chemical reactions, illustrating how theoretical results prompt further experimental studies: (i) diboration of aldehydes catalyzed by copper(I) boryl complexes, (ii) ruthenium-catalyzed C-H amination of arylazides, and (iii) zinc reduction of a vinylcarbyne complex. The concepts and examples presented here are intended for nonspecialists, particularly experimentalists. Together, they illustrate some of the achievements that are possible with a fruitful union of experiment and theory.

Entities:  

Year:  2010        PMID: 20131895     DOI: 10.1021/ar9002027

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  6 in total

1.  Unsupported boron-carbon σ-coordination to platinum as an isolable snapshot of σ-bond activation.

Authors:  Holger Braunschweig; Peter Brenner; Rian D Dewhurst; Ivo Krummenacher; Bernd Pfaffinger; Alfredo Vargas
Journal:  Nat Commun       Date:  2012-05-29       Impact factor: 14.919

2.  From Mechanistic Study to Chiral Catalyst Optimization: Theoretical Insight into Binaphthophosphepine-catalyzed Asymmetric Intramolecular [3 + 2] Cycloaddition.

Authors:  Meng Duan; Lei Zhu; Xiaotian Qi; Zhaoyuan Yu; Yingzi Li; Ruopeng Bai; Yu Lan
Journal:  Sci Rep       Date:  2017-08-08       Impact factor: 4.379

3.  Autonomous Reaction Network Exploration in Homogeneous and Heterogeneous Catalysis.

Authors:  Miguel Steiner; Markus Reiher
Journal:  Top Catal       Date:  2022-01-13       Impact factor: 2.910

4.  Merging Visible Light Photoredox Catalysis with Metal Catalyzed C-H Activations: On the Role of Oxygen and Superoxide Ions as Oxidants.

Authors:  David C Fabry; Magnus Rueping
Journal:  Acc Chem Res       Date:  2016-08-24       Impact factor: 22.384

5.  Beyond static structures: Putting forth REMD as a tool to solve problems in computational organic chemistry.

Authors:  Riccardo Petraglia; Adrien Nicolaï; Matthew D Wodrich; Michele Ceriotti; Clemence Corminboeuf
Journal:  J Comput Chem       Date:  2015-07-31       Impact factor: 3.376

6.  Ligand-Mediated C-Br Oxidative Addition to Cycloplatinated(II) Complexes and Benzyl-Me C-C Bond Reductive Elimination from a Cycloplatinated(IV) Complex.

Authors:  Marzieh Bavi; S Masoud Nabavizadeh; Fatemeh Niroomand Hosseini; Fatemeh Niknam; Peyman Hamidizadeh; S Jafar Hoseini; Fatemeh Raoof; Mahdi M Abu-Omar
Journal:  ACS Omega       Date:  2020-10-29
  6 in total

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