Literature DB >> 20130998

Insights into heliobacterial photosynthesis and physiology from the genome of Heliobacterium modesticaldum.

W Matthew Sattley1, Robert E Blankenship.   

Abstract

The complete annotated genome sequence of Heliobacterium modesticaldum strain Ice1 provides our first glimpse into the genetic potential of the Heliobacteriaceae, a unique family of anoxygenic phototrophic bacteria. H. modesticaldum str. Ice1 is the first completely sequenced phototrophic representative of the Firmicutes, and heliobacteria are the only phototrophic members of this large bacterial phylum. The H. modesticaldum genome consists of a single 3.1-Mb circular chromosome with no plasmids. Of special interest are genomic features that lend insight to the physiology and ecology of heliobacteria, including the genetic inventory of the photosynthesis gene cluster. Genes involved in transport, photosynthesis, and central intermediary metabolism are described and catalogued. The obligately heterotrophic metabolism of heliobacteria is a key feature of the physiology and evolution of these phototrophs. The conspicuous absence of recognizable genes encoding the enzyme ATP-citrate lyase prevents autotrophic growth via the reverse citric acid cycle in heliobacteria, thus being a distinguishing differential characteristic between heliobacteria and green sulfur bacteria. The identities of electron carriers that enable energy conservation by cyclic light-driven electron transfer remain in question.

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Year:  2010        PMID: 20130998     DOI: 10.1007/s11120-010-9529-9

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  34 in total

1.  Molecular evidence for the early evolution of photosynthesis.

Authors:  J Xiong; W M Fischer; K Inoue; M Nakahara; C E Bauer
Journal:  Science       Date:  2000-09-08       Impact factor: 47.728

Review 2.  Type 1 reaction center of photosynthetic heliobacteria.

Authors:  Hirozo Oh-oka
Journal:  Photochem Photobiol       Date:  2007 Jan-Feb       Impact factor: 3.421

3.  Protein sequences and redox titrations indicate that the electron acceptors in reaction centers from heliobacteria are similar to Photosystem I.

Authors:  J T Trost; D C Brune; R E Blankenship
Journal:  Photosynth Res       Date:  1992-04       Impact factor: 3.573

4.  Characterization of a plant-like protochlorophyllide a divinyl reductase in green sulfur bacteria.

Authors:  Aline Gomez Maqueo Chew; Donald A Bryant
Journal:  J Biol Chem       Date:  2006-12-04       Impact factor: 5.157

5.  An enzyme and(13)C-NMR study of carbon metabolism in heliobacteria.

Authors:  M W Pickett; M P Williamson; D J Kelly
Journal:  Photosynth Res       Date:  1994-07       Impact factor: 3.573

6.  Excited states and primary photochemical reactions in the photosynthetic bacterium Heliobacterium chlorum.

Authors:  A M Nuijs; R J Dorssen; L N Duysens; J Amesz
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

7.  Identification of FX in the heliobacterial reaction center as a [4Fe-4S] cluster with an S = 3/2 ground spin state.

Authors:  Mark Heinnickel; Rufat Agalarov; Nina Svensen; Carsten Krebs; John H Golbeck
Journal:  Biochemistry       Date:  2006-05-30       Impact factor: 3.162

8.  ARACHNE: a whole-genome shotgun assembler.

Authors:  Serafim Batzoglou; David B Jaffe; Ken Stanley; Jonathan Butler; Sante Gnerre; Evan Mauceli; Bonnie Berger; Jill P Mesirov; Eric S Lander
Journal:  Genome Res       Date:  2002-01       Impact factor: 9.043

9.  Membrane-bound c-type cytochromes in Heliobacillus mobilis. In vivo study of the hemes involved in electron donation to the photosynthetic reaction center.

Authors:  W Nitschke; U Liebl; K Matsuura; D M Kramer
Journal:  Biochemistry       Date:  1995-09-19       Impact factor: 3.162

10.  The genome of Heliobacterium modesticaldum, a phototrophic representative of the Firmicutes containing the simplest photosynthetic apparatus.

Authors:  W Matthew Sattley; Michael T Madigan; Wesley D Swingley; Patricia C Cheung; Kate M Clocksin; Amber L Conrad; Liza C Dejesa; Barbara M Honchak; Deborah O Jung; Lauren E Karbach; Ahmet Kurdoglu; Surobhi Lahiri; Stephen D Mastrian; Lawrence E Page; Heather L Taylor; Zi T Wang; Jason Raymond; Min Chen; Robert E Blankenship; Jeffrey W Touchman
Journal:  J Bacteriol       Date:  2008-04-25       Impact factor: 3.490

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  7 in total

1.  Purification and biochemical characterization of the ATP synthase from Heliobacterium modesticaldum.

Authors:  Jay-How Yang; Iosifina Sarrou; Jose M Martin-Garcia; Shangji Zhang; Kevin E Redding; Petra Fromme
Journal:  Protein Expr Purif       Date:  2015-05-12       Impact factor: 1.650

2.  Light-driven quinone reduction in heliobacterial membranes.

Authors:  Trevor S Kashey; Dustin D Luu; John C Cowgill; Patricia L Baker; Kevin E Redding
Journal:  Photosynth Res       Date:  2018-03-12       Impact factor: 3.573

3.  A Molecular Biology Tool Kit for the Phototrophic Firmicute Heliobacterium modesticaldum.

Authors:  Patricia L Baker; Gregory S Orf; Zahid Khan; Levi Espinoza; Sabrina Leung; Kimberly Kevershan; Kevin E Redding
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

4.  Using the Endogenous CRISPR-Cas System of Heliobacterium modesticaldum To Delete the Photochemical Reaction Center Core Subunit Gene.

Authors:  Patricia L Baker; Gregory S Orf; Kimberly Kevershan; Michael E Pyne; Taner Bicer; Kevin E Redding
Journal:  Appl Environ Microbiol       Date:  2019-11-14       Impact factor: 4.792

5.  Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications.

Authors:  Kuo-Hsiang Tang; Yinjie J Tang; Robert Eugene Blankenship
Journal:  Front Microbiol       Date:  2011-08-01       Impact factor: 5.640

6.  Structural analysis of diheme cytochrome c by hydrogen-deuterium exchange mass spectrometry and homology modeling.

Authors:  Ying Zhang; Erica L-W Majumder; Hai Yue; Robert E Blankenship; Michael L Gross
Journal:  Biochemistry       Date:  2014-08-27       Impact factor: 3.162

7.  Energy metabolism of Heliobacterium modesticaldum during phototrophic and chemotrophic growth.

Authors:  Kuo-Hsiang Tang; Hai Yue; Robert E Blankenship
Journal:  BMC Microbiol       Date:  2010-05-24       Impact factor: 3.605

  7 in total

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