Literature DB >> 20129649

Protein-phospholipid interactions in blood clotting.

James H Morrissey1, Rebecca L Davis-Harrison, Narjes Tavoosi, Ke Ke, Vincent Pureza, John M Boettcher, Mary C Clay, Chad M Rienstra, Y Zenmei Ohkubo, Taras V Pogorelov, Emad Tajkhorshid.   

Abstract

Most steps of the blood clotting cascade require the assembly of a serine protease with its specific regulatory protein on a suitable phospholipid bilayer. Unfortunately, the molecular details of how blood clotting proteins bind to membrane surfaces remain poorly understood, owing to a dearth of techniques for studying protein-membrane interactions at high resolution. Our laboratories are tackling this question using a combination of approaches, including nanoscale membrane bilayers, solid-state NMR, and large-scale molecular dynamics simulations. These studies are now providing structural insights at atomic resolution into clotting protein-membrane interactions. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20129649      PMCID: PMC2838931          DOI: 10.1016/j.thromres.2010.01.027

Source DB:  PubMed          Journal:  Thromb Res        ISSN: 0049-3848            Impact factor:   3.944


  21 in total

1.  Single-molecule height measurements on microsomal cytochrome P450 in nanometer-scale phospholipid bilayer disks.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-07       Impact factor: 11.205

Review 2.  Finding a single-molecule solution for membrane proteins.

Authors:  Stephen G Sligar
Journal:  Biochem Biophys Res Commun       Date:  2003-12-05       Impact factor: 3.575

3.  Reconstitution and imaging of a membrane protein in a nanometer-size phospholipid bilayer.

Authors:  T H Bayburt; J W Carlson; S G Sligar
Journal:  J Struct Biol       Date:  1998-09       Impact factor: 2.867

4.  Formation of membrane domains during the activation of protein kinase C.

Authors:  L Yang; M Glaser
Journal:  Biochemistry       Date:  1996-11-05       Impact factor: 3.162

5.  Dipole tensor-based atomic-resolution structure determination of a nanocrystalline protein by solid-state NMR.

Authors:  W Trent Franks; Benjamin J Wylie; Heather L Frericks Schmidt; Andrew J Nieuwkoop; Rebecca-Maria Mayrhofer; Gautam J Shah; Daniel T Graesser; Chad M Rienstra
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-14       Impact factor: 11.205

6.  Visualization of Ca2+-induced phospholipid domains.

Authors:  D M Haverstick; M Glaser
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

7.  Self-assembly of single integral membrane proteins into soluble nanoscale phospholipid bilayers.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

8.  Phospholipid phase transitions in homogeneous nanometer scale bilayer discs.

Authors:  Andrew W Shaw; Mark A McLean; Stephen G Sligar
Journal:  FEBS Lett       Date:  2004-01-02       Impact factor: 4.124

9.  Homotropic cooperativity of monomeric cytochrome P450 3A4 in a nanoscale native bilayer environment.

Authors:  Bradley J Baas; Ilia G Denisov; Stephen G Sligar
Journal:  Arch Biochem Biophys       Date:  2004-10-15       Impact factor: 4.013

10.  Directed self-assembly of monodisperse phospholipid bilayer Nanodiscs with controlled size.

Authors:  I G Denisov; Y V Grinkova; A A Lazarides; S G Sligar
Journal:  J Am Chem Soc       Date:  2004-03-24       Impact factor: 15.419

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  15 in total

Review 1.  Peripheral membrane associations of matrix metalloproteinases.

Authors:  Steven R Van Doren; Tara C Marcink; Rama K Koppisetti; Alexander Jurkevich; Yan G Fulcher
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2017-04-23       Impact factor: 4.739

2.  Molecular Orientation Determination in Nanodiscs at the Single-Molecule Level.

Authors:  Tyler Camp; Kritika Mehta; Stephen G Sligar; Kai Zhang
Journal:  Anal Chem       Date:  2019-12-31       Impact factor: 6.986

Review 3.  Nanodiscs as a new tool to examine lipid-protein interactions.

Authors:  Mary A Schuler; Ilia G Denisov; Stephen G Sligar
Journal:  Methods Mol Biol       Date:  2013

4.  GPU/CPU Algorithm for Generalized Born/Solvent-Accessible Surface Area Implicit Solvent Calculations.

Authors:  David E Tanner; James C Phillips; Klaus Schulten
Journal:  J Chem Theory Comput       Date:  2012-06-15       Impact factor: 6.006

5.  How the Linker Connecting the Two Kringles Influences Activation and Conformational Plasticity of Prothrombin.

Authors:  Nicola Pozzi; Zhiwei Chen; Enrico Di Cera
Journal:  J Biol Chem       Date:  2016-01-12       Impact factor: 5.157

6.  Hepatocyte tissue factor activates the coagulation cascade in mice.

Authors:  Bradley P Sullivan; Anna K Kopec; Nikita Joshi; Holly Cline; Juliette A Brown; Stephanie C Bishop; Karen M Kassel; Cheryl Rockwell; Nigel Mackman; James P Luyendyk
Journal:  Blood       Date:  2013-01-10       Impact factor: 22.113

7.  Inhibition of phosphoinositol 3 kinase contributes to nanoparticle-mediated exaggeration of endotoxin-induced leukocyte procoagulant activity.

Authors:  Anna N Ilinskaya; Sonny Man; Anil K Patri; Jeffrey D Clogston; Rachael M Crist; Raul E Cachau; Scott E McNeil; Marina A Dobrovolskaia
Journal:  Nanomedicine (Lond)       Date:  2013-11-27       Impact factor: 5.307

Review 8.  Contributing role of extracellular vesicles on vascular endothelium haemostatic balance in cancer.

Authors:  Céline Bouvy; Damien Gheldof; Christian Chatelain; François Mullier; Jean-Michel Dogné
Journal:  J Extracell Vesicles       Date:  2014-07-11

9.  Characterization of missense mutations in the signal peptide and propeptide of FIX in hemophilia B by a cell-based assay.

Authors:  Wenwen Gao; Yaqi Xu; Hongli Liu; Meng Gao; Qing Cao; Yiyi Wang; Longteng Cui; Rong Huang; Yan Shen; Sanqiang Li; Haiping Yang; Yixiang Chen; Chaokun Li; Haichuan Yu; Weikai Li; Guomin Shen
Journal:  Blood Adv       Date:  2020-08-11

10.  Structure of prothrombin in the closed form reveals new details on the mechanism of activation.

Authors:  Mathivanan Chinnaraj; Zhiwei Chen; Leslie A Pelc; Zachary Grese; Dominika Bystranowska; Enrico Di Cera; Nicola Pozzi
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

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