Literature DB >> 20127475

Generation of expression vectors for high-throughput functional analysis of target genes in Schizosaccharomyces pombe.

Jiwon Ahn1, Chung-Hae Choi, Chang-Mo Kang, Chun-Ho Kim, Hee-Moon Park, Kyung-Bin Song, Kwang-Lae Hoe, Misun Won, Kyung-Sook Chung.   

Abstract

An immediate challenge in the post-genomic era is to assign a biological functions to proteins unraveled by genome analysis. This report is based on studies conducted using Schizosaccharomyces pombe, a simple model organism, and presents various vector systems as tools for high-throughput functional analysis of human genes. We constructed S. pombe expression vectors for efficient cloning of genes via the Gateway system. We modified the pREP and pSLF series vectors, which are widely used for gene expression in S. pombe. The vectors constructed have a uniform backbone of S. pombe autonomously replicating sequence (ARS) elements with different selective markers, namely, urw4 (+) and Saccharomyces cerevisiae LEU2 complementing leul. These vectors contain 3 different strengths of the inducible promoter nmtl, which affect the expression levels of the cloned open reading frames (ORFs). Further, target proteins can be fused with an N-terminal or C-terminal tag such as triple hemagglutinin (3x HA), enhanced green fluorescent protein (EGFP), or Discosoma red fluorescent protein (DsRed). We tested the feasibility of the constructed vectors by using 3 human genes, namely, RAB18, SCC-112, and PTEN. Proper expression of tagged RAB18 was confirmed by western blot analysis. Further, localization of RAB18, SCC112, and PTEN was demonstrated. The constructed vectors can be utilized for high-throughput functional analysis of heterologous genes.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20127475     DOI: 10.1007/s12275-009-0010-4

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  31 in total

1.  Membrane-binding and activation mechanism of PTEN.

Authors:  Sudipto Das; Jack E Dixon; Wonhwa Cho
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-13       Impact factor: 11.205

2.  Intracellular expression of recombinant antibody fluorescent protein fusions for localization of target antigens in Schizosaccharomyces pombe.

Authors:  Michelle A Alting-Mees; Eddy P Risseeuw; Enwu Liu; Michel Desautels; William A Crosby; Sean M Hemmingsen
Journal:  Methods Mol Biol       Date:  2006

3.  A novel protein, Psp1, essential for cell cycle progression of Schizosaccharomyces pombe is phosphorylated by Cdc2-Cdc13 upon entry into G0-like stationary phase of cell growth.

Authors:  Y J Jang; M Won; K S Chung; D U Kim; K L Hoe; C Park; H S Yoo
Journal:  J Biol Chem       Date:  1997-08-08       Impact factor: 5.157

4.  General purpose tagging vectors for fission yeast.

Authors:  S L Forsburg; D A Sherman
Journal:  Gene       Date:  1997-06-03       Impact factor: 3.688

5.  Construction and characterization of a series of vectors for Schizosaccharomyces pombe.

Authors:  C Adams; D Haldar; R T Kamakaka
Journal:  Yeast       Date:  2005-12       Impact factor: 3.239

6.  Optimized cassettes for fluorescent protein tagging in Saccharomyces cerevisiae.

Authors:  Mark A Sheff; Kurt S Thorn
Journal:  Yeast       Date:  2004-06       Impact factor: 3.239

7.  Construction of a marker gene cassette which is repeatedly usable for gene disruption in yeast.

Authors:  A Toh-e
Journal:  Curr Genet       Date:  1995-03       Impact factor: 3.886

8.  A suite of Gateway cloning vectors for high-throughput genetic analysis in Saccharomyces cerevisiae.

Authors:  Simon Alberti; Aaron D Gitler; Susan Lindquist
Journal:  Yeast       Date:  2007-10       Impact factor: 3.239

9.  TATA box mutations in the Schizosaccharomyces pombe nmt1 promoter affect transcription efficiency but not the transcription start point or thiamine repressibility.

Authors:  G Basi; E Schmid; K Maundrell
Journal:  Gene       Date:  1993-01-15       Impact factor: 3.688

10.  arg3+, a new selection marker system for Schizosaccharomyces pombe: application of ura4+ as a removable integration marker.

Authors:  S Waddell; J R Jenkins
Journal:  Nucleic Acids Res       Date:  1995-05-25       Impact factor: 16.971

View more
  2 in total

Review 1.  Humanized yeast to model human biology, disease and evolution.

Authors:  Aashiq H Kachroo; Michelle Vandeloo; Brittany M Greco; Mudabir Abdullah
Journal:  Dis Model Mech       Date:  2022-06-06       Impact factor: 5.732

2.  Sensitive and Quantitative Three-Color Protein Imaging in Fission Yeast Using Spectrally Diverse, Recoded Fluorescent Proteins with Experimentally-Characterized In Vivo Maturation Kinetics.

Authors:  Bassem Al-Sady; Rachel A Greenstein; Hana J El-Samad; Sigurd Braun; Hiten D Madhani
Journal:  PLoS One       Date:  2016-08-01       Impact factor: 3.240

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.