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Literature DB >> 20127205

The coming of age of the hippocampome.

Giorgio A Ascoli.

Abstract

Mesh：

Year: 2010 PMID： 20127205 DOI： 10.1007/s12021-010-9063-0

Source DB: PubMed Journal: Neuroinformatics ISSN： 1539-2791

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13 in total

1. On the fine structure of the pes Hippocampi major (with plates XIII-XXIII). 1886.

Authors: C Golgi; M Bentivoglio; L Swanson
Journal: Brain Res Bull Date: 2001-03-15 Impact factor: 4.077

2. The rise of the 'projectome'.

Authors: Narayanan Kasthuri; Jeff W Lichtman
Journal: Nat Methods Date: 2007-04 Impact factor: 28.547

3. Neuroinformatics grand challenges.

Authors: Giorgio A Ascoli
Journal: Neuroinformatics Date: 2008

4. Matching spatial with ontological brain regions using Java tools for visualization, database access, and integrated data analysis.

Authors: Gleb Bezgin; Andrew T Reid; Dirk Schubert; Rolf Kötter
Journal: Neuroinformatics Date: 2009-01-15

5. The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience.

Authors: William J Bug; Giorgio A Ascoli; Jeffrey S Grethe; Amarnath Gupta; Christine Fennema-Notestine; Angela R Laird; Stephen D Larson; Daniel Rubin; Gordon M Shepherd; Jessica A Turner; Maryann E Martone
Journal: Neuroinformatics Date: 2008-10-31

Review 6. A technicolour approach to the connectome.

Authors: Jeff W Lichtman; Jean Livet; Joshua R Sanes
Journal: Nat Rev Neurosci Date: 2008-04-30 Impact factor: 34.870

7. MDL constrained 3-D grayscale skeletonization algorithm for automated extraction of dendrites and spines from fluorescence confocal images.

Authors: Xiaosong Yuan; Joshua T Trachtenberg; Steve M Potter; Badrinath Roysam
Journal: Neuroinformatics Date: 2009-12-11

Review 8. Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex.

Authors: Giorgio A Ascoli; Lidia Alonso-Nanclares; Stewart A Anderson; German Barrionuevo; Ruth Benavides-Piccione; Andreas Burkhalter; György Buzsáki; Bruno Cauli; Javier Defelipe; Alfonso Fairén; Dirk Feldmeyer; Gord Fishell; Yves Fregnac; Tamas F Freund; Daniel Gardner; Esther P Gardner; Jesse H Goldberg; Moritz Helmstaedter; Shaul Hestrin; Fuyuki Karube; Zoltán F Kisvárday; Bertrand Lambolez; David A Lewis; Oscar Marin; Henry Markram; Alberto Muñoz; Adam Packer; Carl C H Petersen; Kathleen S Rockland; Jean Rossier; Bernardo Rudy; Peter Somogyi; Jochen F Staiger; Gabor Tamas; Alex M Thomson; Maria Toledo-Rodriguez; Yun Wang; David C West; Rafael Yuste
Journal: Nat Rev Neurosci Date: 2008-07 Impact factor: 34.870

9. An automated pipeline for dendrite spine detection and tracking of 3D optical microscopy neuron images of in vivo mouse models.

Authors: Jing Fan; Xiaobo Zhou; Jennifer G Dy; Yong Zhang; Stephen T C Wong
Journal: Neuroinformatics Date: 2009-05-12

10. A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale.

Authors: Jason W Bohland; Caizhi Wu; Helen Barbas; Hemant Bokil; Mihail Bota; Hans C Breiter; Hollis T Cline; John C Doyle; Peter J Freed; Ralph J Greenspan; Suzanne N Haber; Michael Hawrylycz; Daniel G Herrera; Claus C Hilgetag; Z Josh Huang; Allan Jones; Edward G Jones; Harvey J Karten; David Kleinfeld; Rolf Kötter; Henry A Lester; John M Lin; Brett D Mensh; Shawn Mikula; Jaak Panksepp; Joseph L Price; Joseph Safdieh; Clifford B Saper; Nicholas D Schiff; Jeremy D Schmahmann; Bruce W Stillman; Karel Svoboda; Larry W Swanson; Arthur W Toga; David C Van Essen; James D Watson; Partha P Mitra
Journal: PLoS Comput Biol Date: 2009-03-27 Impact factor: 4.475

6 in total

The coming of age of the hippocampome.

1. On the fine structure of the pes Hippocampi major (with plates XIII-XXIII). 1886.

2. The rise of the 'projectome'.

3. Neuroinformatics grand challenges.

4. Matching spatial with ontological brain regions using Java tools for visualization, database access, and integrated data analysis.

5. The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience.

Review 6. A technicolour approach to the connectome.

7. MDL constrained 3-D grayscale skeletonization algorithm for automated extraction of dendrites and spines from fluorescence confocal images.

Review 8. Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex.

9. An automated pipeline for dendrite spine detection and tracking of 3D optical microscopy neuron images of in vivo mouse models.

10. A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale.

1. Three-dimensional interactive and stereotactic human brain atlas of white matter tracts.

Review 2. Towards the automatic classification of neurons.

3. Communication structure of cortical networks.

4. The connectome viewer toolkit: an open source framework to manage, analyze, and visualize connectomes.

5. NeuroLex.org: an online framework for neuroscience knowledge.

Review 6. The mind-brain relationship as a mathematical problem.