Literature DB >> 20123074

HMGB1: roles in base excision repair and related function.

Yuan Liu1, Rajendra Prasad, Samuel H Wilson.   

Abstract

High mobility group box 1 (HMGB1) is a nonhistone architectural protein that is involved in many biological processes including chromatin remodeling, transcription, cell signaling of inflammation, DNA damage repair and others. Recent studies have identified the cross-link of HMGB1 with a DNA base excision repair intermediate indicating that this protein is involved in base excision repair (BER) pathway. Further characterization of the roles of HMGB1 in BER demonstrates that the protein acts as a cofactor to regulate BER sub-pathways by inhibiting single-nucleotide BER and stimulating long-patch BER through modulating the activities of base excision repair enzymes. Directing of base lesion repair to the long-patch sub-pathway can result in trinucleotide repeat instability suggesting an important role of HMGB1 in modulating genome stability. Published by Elsevier B.V.

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Year:  2010        PMID: 20123074      PMCID: PMC2818529          DOI: 10.1016/j.bbagrm.2009.11.008

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  58 in total

1.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

2.  The lack of chromosomal protein Hmg1 does not disrupt cell growth but causes lethal hypoglycaemia in newborn mice.

Authors:  S Calogero; F Grassi; A Aguzzi; T Voigtländer; P Ferrier; S Ferrari; M E Bianchi
Journal:  Nat Genet       Date:  1999-07       Impact factor: 38.330

3.  HMG-1 as a late mediator of endotoxin lethality in mice.

Authors:  H Wang; O Bloom; M Zhang; J M Vishnubhakat; M Ombrellino; J Che; A Frazier; H Yang; S Ivanova; L Borovikova; K R Manogue; E Faist; E Abraham; J Andersson; U Andersson; P E Molina; N N Abumrad; A Sama; K J Tracey
Journal:  Science       Date:  1999-07-09       Impact factor: 47.728

4.  Basis for recognition of cisplatin-modified DNA by high-mobility-group proteins.

Authors:  U M Ohndorf; M A Rould; Q He; C O Pabo; S J Lippard
Journal:  Nature       Date:  1999-06-17       Impact factor: 49.962

5.  Preferential binding of high mobility group 1 protein to UV-damaged DNA. Role of the COOH-terminal domain.

Authors:  E A Pasheva; I G Pashev; A Favre
Journal:  J Biol Chem       Date:  1998-09-18       Impact factor: 5.157

6.  High mobility group proteins 1 and 2 can function as DNA-binding regulatory components for DNA-dependent protein kinase in vitro.

Authors:  Y Yumoto; H Shirakawa; M Yoshida; A Suwa; F Watanabe; H Teraoka
Journal:  J Biochem       Date:  1998-09       Impact factor: 3.387

7.  Saccharomyces cerevisiae flap endonuclease 1 uses flap equilibration to maintain triplet repeat stability.

Authors:  Yuan Liu; Haihua Zhang; Janaki Veeraraghavan; Robert A Bambara; Catherine H Freudenreich
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

8.  AP endonuclease-independent DNA base excision repair in human cells.

Authors:  Lee Wiederhold; John B Leppard; Padmini Kedar; Feridoun Karimi-Busheri; Aghdass Rasouli-Nia; Michael Weinfeld; Alan E Tomkinson; Tadahide Izumi; Rajendra Prasad; Samuel H Wilson; Sankar Mitra; Tapas K Hazra
Journal:  Mol Cell       Date:  2004-07-23       Impact factor: 17.970

9.  Network of dynamic interactions between histone H1 and high-mobility-group proteins in chromatin.

Authors:  Frédéric Catez; Huan Yang; Kevin J Tracey; Raymond Reeves; Tom Misteli; Michael Bustin
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

10.  In situ analysis of repair processes for oxidative DNA damage in mammalian cells.

Authors:  Li Lan; Satoshi Nakajima; Yoshitsugu Oohata; Masashi Takao; Satoshi Okano; Mitsuko Masutani; Samuel H Wilson; Akira Yasui
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-13       Impact factor: 11.205

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  56 in total

1.  HMGB1 gene knockout in mouse embryonic fibroblasts results in reduced telomerase activity and telomere dysfunction.

Authors:  Eva Polanská; Zuzana Dobšáková; Martina Dvořáčková; Jiří Fajkus; Michal Štros
Journal:  Chromosoma       Date:  2012-04-28       Impact factor: 4.316

Review 2.  DNA base excision repair: a mechanism of trinucleotide repeat expansion.

Authors:  Yuan Liu; Samuel H Wilson
Journal:  Trends Biochem Sci       Date:  2012-01-27       Impact factor: 13.807

3.  DNA bridging and looping by HMO1 provides a mechanism for stabilizing nucleosome-free chromatin.

Authors:  Divakaran Murugesapillai; Micah J McCauley; Ran Huo; Molly H Nelson Holte; Armen Stepanyants; L James Maher; Nathan E Israeloff; Mark C Williams
Journal:  Nucleic Acids Res       Date:  2014-07-24       Impact factor: 16.971

4.  Adenovirus Core Protein VII Downregulates the DNA Damage Response on the Host Genome.

Authors:  Daphne C Avgousti; Ashley N Della Fera; Clayton J Otter; Christin Herrmann; Neha J Pancholi; Matthew D Weitzman
Journal:  J Virol       Date:  2017-09-27       Impact factor: 5.103

Review 5.  Base excision repair.

Authors:  Hans E Krokan; Magnar Bjørås
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-04-01       Impact factor: 10.005

Review 6.  High mobility group protein 1: A collaborator in nucleosome dynamics and estrogen-responsive gene expression.

Authors:  William M Scovell
Journal:  World J Biol Chem       Date:  2016-05-26

7.  HMGB1 Stimulates Activity of Polymerase β on Nucleosome Substrates.

Authors:  Angela Balliano; Fanfan Hao; Catherine Njeri; Lata Balakrishnan; Jeffrey J Hayes
Journal:  Biochemistry       Date:  2017-01-18       Impact factor: 3.162

8.  Alarmin high-mobility group B1 (HMGB1) is regulated in human adipocytes in insulin resistance and influences insulin secretion in β-cells.

Authors:  R Guzmán-Ruiz; F Ortega; A Rodríguez; R Vázquez-Martínez; A Díaz-Ruiz; S Garcia-Navarro; M Giralt; A Garcia-Rios; D Cobo-Padilla; F J Tinahones; J López-Miranda; F Villarroya; G Frühbeck; J M Fernández-Real; M M Malagón
Journal:  Int J Obes (Lond)       Date:  2014-02-28       Impact factor: 5.095

Review 9.  Interactions of high mobility group box protein 1 (HMGB1) with nucleic acids: Implications in DNA repair and immune responses.

Authors:  Pooja Mandke; Karen M Vasquez
Journal:  DNA Repair (Amst)       Date:  2019-09-16

Review 10.  Oxidized base damage and single-strand break repair in mammalian genomes: role of disordered regions and posttranslational modifications in early enzymes.

Authors:  Muralidhar L Hegde; Tadahide Izumi; Sankar Mitra
Journal:  Prog Mol Biol Transl Sci       Date:  2012       Impact factor: 3.622

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