Literature DB >> 20121126

Diagonal-free 3D/4D HN,HN-TROSY-NOESY-TROSY.

Tammo Diercks1, Vincent Truffault, Murray Coles, Oscar Millet.   

Abstract

Structural biology by NMR spectroscopy relies on measuring interproton distances via NOE cross-signals in nuclear Overhauser effect spectroscopy (NOESY) spectra. In proteins, the subset of H(N)-H'(N) NOE contacts is most important for deriving initial structural models and for spectral assignment by "NOE walking". Here we present a fully optimized NMR experiment for measuring these pivotal contacts: diagonal-free 3D/4D HN,HN-TROSY-NOESY-TROSY. It combines all of the critical requirements for extracting the optimal H(N)-H'(N) distance information: the highest resolution by consistent transverse relaxation-optimized spectroscopy (TROSY) evolution, the largest spectral dispersion in two (15)N dimensions, and maximal coverage and purity through specific suppression of the intense diagonal signals that are the main source of overlap, artifacts, and bias in any NOESY spectrum. Most notably, diagonal suppression here comes without compromising the NOE cross-signal intensities. This optimized experiment appears to be ideal for a broad range of structural studies, particularly on large deuterated, partially unfolded, helical, and membrane proteins.

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Year:  2010        PMID: 20121126     DOI: 10.1021/ja910523q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

1.  Efficient acquisition of high-resolution 4-D diagonal-suppressed methyl-methyl NOESY for large proteins.

Authors:  Jie Wen; Pei Zhou; Jihui Wu
Journal:  J Magn Reson       Date:  2012-03-09       Impact factor: 2.229

2.  4D Non-uniformly sampled C,C-NOESY experiment for sequential assignment of 13C, 15N-labeled RNAs.

Authors:  Jan Stanek; Peter Podbevšek; Wiktor Koźmiński; Janez Plavec; Mirko Cevec
Journal:  J Biomol NMR       Date:  2013-08-21       Impact factor: 2.835

3.  Selective diagonal-free (13)C, (13)C-edited aliphatic-aromatic NOESY experiment with non-uniform sampling.

Authors:  Jan Stanek; Michał Nowakowski; Saurabh Saxena; Katarzyna Ruszczyńska-Bartnik; Andrzej Ejchart; Wiktor Koźmiński
Journal:  J Biomol NMR       Date:  2013-05-09       Impact factor: 2.835

4.  Solid-state NMR structure determination from diagonal-compensated, sparsely nonuniform-sampled 4D proton-proton restraints.

Authors:  Rasmus Linser; Benjamin Bardiaux; Loren B Andreas; Sven G Hyberts; Vanessa K Morris; Guido Pintacuda; Margaret Sunde; Ann H Kwan; Gerhard Wagner
Journal:  J Am Chem Soc       Date:  2014-07-25       Impact factor: 15.419

5.  A general method for diagonal peak suppression in homonuclear correlated NMR spectra by spatially and frequency selective pulses.

Authors:  Simon Glanzer; Evelyne Schrank; Klaus Zangger
Journal:  J Magn Reson       Date:  2013-04-22       Impact factor: 2.229

  5 in total

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