Literature DB >> 20118935

Crystal structure of an intramolecular chaperone mediating triple-beta-helix folding.

Eike C Schulz1, Achim Dickmanns, Henning Urlaub, Andreas Schmitt, Martina Mühlenhoff, Katharina Stummeyer, David Schwarzer, Rita Gerardy-Schahn, Ralf Ficner.   

Abstract

Protein folding is often mediated by molecular chaperones. Recently, a novel class of intramolecular chaperones has been identified in tailspike proteins of evolutionarily distant viruses, which require a C-terminal chaperone for correct folding. The highly homologous chaperone domains are interchangeable between pre-proteins and release themselves after protein folding. Here we report the crystal structures of two intramolecular chaperone domains in either the released or the pre-cleaved form, revealing the role of the chaperone domain in the formation of a triple-beta-helix fold. Tentacle-like protrusions enclose the polypeptide chains of the pre-protein during the folding process. After the assembly, a sensory mechanism for correctly folded beta-helices triggers a serine-lysine catalytic dyad to autoproteolytically release the mature protein. Sequence analysis shows a conservation of the intramolecular chaperones in functionally unrelated proteins sharing beta-helices as a common structural motif.

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Year:  2010        PMID: 20118935     DOI: 10.1038/nsmb.1746

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  39 in total

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2.  Recent developments in the PHENIX software for automated crystallographic structure determination.

Authors:  Paul D Adams; Kreshna Gopal; Ralf W Grosse-Kunstleve; Li-Wei Hung; Thomas R Ioerger; Airlie J McCoy; Nigel W Moriarty; Reetal K Pai; Randy J Read; Tod D Romo; James C Sacchettini; Nicholas K Sauter; Laurent C Storoni; Thomas C Terwilliger
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3.  Proteolytic processing and oligomerization of bacteriophage-derived endosialidases.

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Journal:  J Biol Chem       Date:  2003-01-29       Impact factor: 5.157

Review 4.  Homotrimeric, beta-stranded viral adhesins and tail proteins.

Authors:  Peter R Weigele; Eben Scanlon; Jonathan King
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

5.  Structure of the periplasmic chaperone Skp suggests functional similarity with cytosolic chaperones despite differing architecture.

Authors:  Ingo P Korndörfer; Monica K Dommel; Arne Skerra
Journal:  Nat Struct Mol Biol       Date:  2004-09-12       Impact factor: 15.369

Review 6.  Convergent evolution of clamp-like binding sites in diverse chaperones.

Authors:  Peter C Stirling; Samuel F Bakhoum; Andrea B Feigl; Michel R Leroux
Journal:  Nat Struct Mol Biol       Date:  2006-10       Impact factor: 15.369

Review 7.  The intramolecular chaperone-mediated protein folding.

Authors:  Yu-Jen Chen; Masayori Inouye
Journal:  Curr Opin Struct Biol       Date:  2008-11-13       Impact factor: 6.809

8.  An intersubunit active site between supercoiled parallel beta helices in the trimeric tailspike endorhamnosidase of Shigella flexneri Phage Sf6.

Authors:  Jürgen J Müller; Stefanie Barbirz; Karolin Heinle; Alexander Freiberg; Robert Seckler; Udo Heinemann
Journal:  Structure       Date:  2008-05       Impact factor: 5.006

9.  Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05

10.  Model preparation in MOLREP and examples of model improvement using X-ray data.

Authors:  Andrey A Lebedev; Alexei A Vagin; Garib N Murshudov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
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  33 in total

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Authors:  Carmela Garcia-Doval; Daniel Luque; José R Castón; Pascale Boulanger; Mark J van Raaij
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2.  Phage Proteins Required for Tail Fiber Assembly Also Bind Specifically to the Surface of Host Bacterial Strains.

Authors:  Olesia I North; Alan R Davidson
Journal:  J Bacteriol       Date:  2021-01-11       Impact factor: 3.490

3.  The host-binding domain of the P2 phage tail spike reveals a trimeric iron-binding structure.

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Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-07-13

4.  A multivalent adsorption apparatus explains the broad host range of phage phi92: a comprehensive genomic and structural analysis.

Authors:  David Schwarzer; Falk F R Buettner; Christopher Browning; Sergey Nazarov; Wolfgang Rabsch; Andrea Bethe; Astrid Oberbeck; Valorie D Bowman; Katharina Stummeyer; Martina Mühlenhoff; Petr G Leiman; Rita Gerardy-Schahn
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5.  The LRR-TM protein PAN-1 interacts with MYRF to promote its nuclear translocation in synaptic remodeling.

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6.  The K5 lyase KflA combines a viral tail spike structure with a bacterial polysaccharide lyase mechanism.

Authors:  James E Thompson; Meraj Pourhossein; Amy Waterhouse; Thomas Hudson; Marie Goldrick; Jeremy P Derrick; Ian S Roberts
Journal:  J Biol Chem       Date:  2010-06-02       Impact factor: 5.157

Review 7.  Bacteriophage protein-protein interactions.

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Journal:  Adv Virus Res       Date:  2012       Impact factor: 9.937

8.  Myrf ER-Bound Transcription Factors Drive C. elegans Synaptic Plasticity via Cleavage-Dependent Nuclear Translocation.

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9.  The C-terminal cysteine annulus participates in auto-chaperone function for Salmonella phage P22 tailspike folding and assembly.

Authors:  Takumi Takata; Cameron Haase-Pettingell; Jonathan King
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10.  Crystal structure of the MyRF ICA domain with its upstream β-helical stalk reveals the molecular mechanisms underlying its trimerization and self-cleavage.

Authors:  Pei Wu; Xiangkai Zhen; Bowen Li; Qian Yu; Xiaochen Huang; Ning Shi
Journal:  Int J Biol Sci       Date:  2021-07-13       Impact factor: 6.580

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