Literature DB >> 20103924

Gene targeting using the human Nalm-6 pre-B cell line.

Noritaka Adachi1, Hitoshi Nishijima, Kei-ichi Shibahara.   

Abstract

Gene targeting by homologous recombination is a powerful tool to precisely manipulate the genome in order to study the function of a gene of interest (GOI). Indeed, it has become a routine methodology in yeasts, murine embryonic stem cells, and a chicken DT40 cell line. However, gene targeting has not been used often in human somatic cells to date since the relative efficiency of gene targeting (the ratio of homologous integrations to random integrations) is remarkably low. In this review, we introduce a fundamental strategy and a protocol to generate a null allele and/or 'tetracycline-inducible conditional gene knochout' for the GOI by gene targeting in the human Nalm-6 pre-B cell line. The Nalm-6 is a rare cell line in which gene targeting by homologous recombination takes place efficiently, and it carries a stable near-diploid karyotype with a doubling time of around 20 h. In addition, the tetracycline-regulated gene depletion (Tet-Off) system is steadily applicable to this cell line. Therefore, gene targeting systems using the Nalm-6 cell are used increasingly and offer promise in the study of human gene functions. This review should prove useful to researchers in a wide rage of fields.

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Year:  2008        PMID: 20103924

Source DB:  PubMed          Journal:  Biosci Trends        ISSN: 1881-7815            Impact factor:   2.400


  3 in total

Review 1.  Mechanisms of gene targeting in higher eukaryotes.

Authors:  Akinori Tokunaga; Hirofumi Anai; Katsuhiro Hanada
Journal:  Cell Mol Life Sci       Date:  2015-10-27       Impact factor: 9.261

2.  LEDGF/p75-independent HIV-1 replication demonstrates a role for HRP-2 and remains sensitive to inhibition by LEDGINs.

Authors:  Rik Schrijvers; Jan De Rijck; Jonas Demeulemeester; Noritaka Adachi; Sofie Vets; Keshet Ronen; Frauke Christ; Frederic D Bushman; Zeger Debyser; Rik Gijsbers
Journal:  PLoS Pathog       Date:  2012-03-01       Impact factor: 6.823

3.  Increased Gene Targeting in Hyper-Recombinogenic LymphoBlastoid Cell Lines Leaves Unchanged DSB Processing by Homologous Recombination.

Authors:  Emil Mladenov; Katja Paul-Konietzko; Veronika Mladenova; Martin Stuschke; George Iliakis
Journal:  Int J Mol Sci       Date:  2022-08-16       Impact factor: 6.208

  3 in total

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