Literature DB >> 20099814

Enzymatic processing of platinated RNAs.

Erich G Chapman1, Victoria J DeRose.   

Abstract

The broadly prescribed antitumor drug cisplatin coordinates to DNA, altering the activity of cellular proteins whose functions rely upon sensing DNA structure. Cisplatin is also known to coordinate to RNA, but the effects of RNA-Pt adducts on the large number of proteins that process the transcriptome are currently unknown. In an effort to address how platination of an RNA alters the function of RNA processing enzymes, we have determined the influence of [Pt(NH(3))(2)](2+)-RNA adducts on the activities of 3'-->5' and 5'-->3' phosphodiesterases, a purine-specific endoribonuclease, and a reverse transcriptase. Single Pt(II) adducts on RNA oligonucleotides of the form (5'-U(6)-XY-U(5)-3': XY = GG, GA, AG, GU) are found to block exonucleolytic digestion. Similar disruption of endonucleolytic cleavage is observed, except for the platinated XY = GA RNA where RNase U2 uniquely tolerates platinum modification. Platinum adducts formed with a more complex RNA prevent reverse transcription, providing evidence that platination is capable of interfering with RNA's role in relaying sequence information. The observed disruptions in enzymatic activity point to the possibility that cellular RNA processing may be similarly affected, which could contribute to the cell-wide effects of platinum antitumor drugs. Additionally, we show that thiourea reverses cisplatin-RNA adducts, providing a chemical tool for use in future studies regarding cisplatin targeting of cellular RNAs.

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Year:  2010        PMID: 20099814      PMCID: PMC3230263          DOI: 10.1021/ja908419j

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  53 in total

Review 1.  RNA processing and human disease.

Authors:  A V Philips; T A Cooper
Journal:  Cell Mol Life Sci       Date:  2000-02       Impact factor: 9.261

2.  Determination of platinated purines in oligoribonucleotides by limited digestion with ribonucleases T1 and U2.

Authors:  Marine Escaffre; Alain Favre; Jean-Claude Chottard; Sophie Bombard
Journal:  Anal Biochem       Date:  2002-11-01       Impact factor: 3.365

3.  Bifunctional binding of cisplatin to DNA: why does cisplatin form 1,2-intrastrand cross-links with ag but not with GA?

Authors:  Yogita Mantri; Stephen J Lippard; Mu-Hyun Baik
Journal:  J Am Chem Soc       Date:  2007-04-03       Impact factor: 15.419

4.  Platination of the siRNA sense-strand modulates both efficacy and selectivity in vitro.

Authors:  Margareta Hägerlöf; Hanna Hedman; Sofi K C Elmroth
Journal:  Biochem Biophys Res Commun       Date:  2007-07-06       Impact factor: 3.575

5.  A new role for cisplatin: probing ribosomal RNA structure.

Authors:  Keshab Rijal; Christine S Chow
Journal:  Chem Commun (Camb)       Date:  2008-11-10       Impact factor: 6.222

6.  More pronounced salt dependence and higher reactivity for platination of the hairpin r(CGCGUUGUUCGCG) compared with d(CGCGTTGTTCGCG).

Authors:  Margareta Hägerlöf; Pal Papsai; Christine S Chow; Sofi K C Elmroth
Journal:  J Biol Inorg Chem       Date:  2006-09-05       Impact factor: 3.358

7.  Metal interactions with a GAAA RNA tetraloop characterized by (31)P NMR and phosphorothioate substitutions.

Authors:  M Maderia; T E Horton; V J DeRose
Journal:  Biochemistry       Date:  2000-07-18       Impact factor: 3.162

8.  RNA-selective modification by a platinum(II) complex conjugated to amino- and guanidinoglycosides.

Authors:  Jürgen Boer; Kenneth F Blount; Nathan W Luedtke; Lev Elson-Schwab; Yitzhak Tor
Journal:  Angew Chem Int Ed Engl       Date:  2005-01-28       Impact factor: 15.336

9.  Inhibition of pre-mRNA splicing by cisplatin and platinum analogs.

Authors:  Thomas D Schmittgen; Jing-Fang Ju; Kathleen D Danenberg; Peter V Danenberg
Journal:  Int J Oncol       Date:  2003-09       Impact factor: 5.650

10.  The influence of Cisplatin on the gas-phase dissociation of oligonucleotides studied by electrospray ionization tandem mass spectrometry.

Authors:  Adrien Nyakas; Michael Eymann; Stefan Schürch
Journal:  J Am Soc Mass Spectrom       Date:  2008-12-31       Impact factor: 3.262

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  12 in total

1.  Site-specific platinum(II) cross-linking in a ribozyme active site.

Authors:  Erich G Chapman; Victoria J DeRose
Journal:  J Am Chem Soc       Date:  2011-12-14       Impact factor: 15.419

2.  RNA-Pt adducts following cisplatin treatment of Saccharomyces cerevisiae.

Authors:  Alethia A Hostetter; Maire F Osborn; Victoria J DeRose
Journal:  ACS Chem Biol       Date:  2011-11-15       Impact factor: 5.100

Review 3.  Binding of kinetically inert metal ions to RNA: the case of platinum(II).

Authors:  Erich G Chapman; Alethia A Hostetter; Maire F Osborn; Amanda L Miller; Victoria J DeRose
Journal:  Met Ions Life Sci       Date:  2011

4.  Biophysical properties, thermal stability and functional impact of 8-oxo-7,8-dihydroguanine on oligonucleotides of RNA-a study of duplex, hairpins and the aptamer for preQ1 as models.

Authors:  Yu J Choi; Krzysztof S Gibala; Tewoderos Ayele; Katherine V Deventer; Marino J E Resendiz
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971

5.  Ru binding to RNA following treatment with the antimetastatic prodrug NAMI-A in Saccharomyces cerevisiae and in vitro.

Authors:  Alethia A Hostetter; Michelle L Miranda; Victoria J DeRose; Karen L McFarlane Holman
Journal:  J Biol Inorg Chem       Date:  2011-07-08       Impact factor: 3.358

6.  Identification of RNA Fragments Resulting from Enzymatic Degradation using MALDI-TOF Mass Spectrometry.

Authors:  Shawn W Schowe; Conner J Langeberg; Erich G Chapman; Kitty Brown; Marino J E Resendiz
Journal:  J Vis Exp       Date:  2022-04-11       Impact factor: 1.424

7.  Picazoplatin, an azide-containing platinum(II) derivative for target analysis by click chemistry.

Authors:  Jonathan D White; Maire F Osborn; Alan D Moghaddam; Lindsay E Guzman; Michael M Haley; Victoria J DeRose
Journal:  J Am Chem Soc       Date:  2013-08-06       Impact factor: 15.419

8.  Biophysical properties and thermal stability of oligonucleotides of RNA containing 7,8-dihydro-8-hydroxyadenosine.

Authors:  Ana M Chauca-Diaz; Yu Jung Choi; Marino J E Resendiz
Journal:  Biopolymers       Date:  2015-03       Impact factor: 2.505

9.  Cisplatin Targeting of Bacterial Ribosomal RNA Hairpins.

Authors:  Gayani N P Dedduwa-Mudalige; Christine S Chow
Journal:  Int J Mol Sci       Date:  2015-09-07       Impact factor: 5.923

10.  Platinum-RNA modifications following drug treatment in S. cerevisiae identified by click chemistry and enzymatic mapping.

Authors:  Maire F Osborn; Jonathan D White; Michael M Haley; Victoria J DeRose
Journal:  ACS Chem Biol       Date:  2014-08-15       Impact factor: 5.100

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