Literature DB >> 20098765

Structure-function study of peroxidase-like G-quadruplex-hemin complexes.

De-Ming Kong1, Wei Yang, Jing Wu, Chen-Xi Li, Han-Xi Shen.   

Abstract

The structure-function relationship of G-quadruplex-hemin complexes with peroxidase activity was studied by comparing peroxidase activity and circular dichroism (CD) spectra of 22 oligonucleotides with the sequence of d(G(2)T(n))(3)G(2), d(G(3)T(n))(3)G(3) (n = 1-4) and dG(3)T(i)G(3)T(j)G(3)T(k)G(3). According to the experimental results, some conclusions can be drawn, such as the addition of hemin may promote the conversion of some G-quadruplexes from antiparallel structures to parallel structures; the formation of G-quadruplexes is a crucial factor in determining the peroxidase activity of G-quadruplex-hemin complexes; and the complexes formed by hemin and parallel G-quadruplexes have much higher peroxidase activity than those formed by hemin and antiparallel G-quadruplexes.

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Year:  2009        PMID: 20098765     DOI: 10.1039/b920293e

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  16 in total

Review 1.  Discriminating between Parallel, Anti-Parallel and Hybrid G-Quadruplexes: Mechanistic Details on Their Binding to Small Molecules.

Authors:  Tarita Biver
Journal:  Molecules       Date:  2022-06-29       Impact factor: 4.927

2.  Input-dependent induction of oligonucleotide structural motifs for performing molecular logic.

Authors:  Tao Li; Damian Ackermann; Anna M Hall; Michael Famulok
Journal:  J Am Chem Soc       Date:  2012-02-08       Impact factor: 15.419

3.  Heme activation by DNA: isoguanine pentaplexes, but not quadruplexes, bind heme and enhance its oxidative activity.

Authors:  Nisreen Shumayrikh; Yu Chuan Huang; Dipankar Sen
Journal:  Nucleic Acids Res       Date:  2015-03-30       Impact factor: 16.971

4.  Altered biochemical specificity of G-quadruplexes with mutated tetrads.

Authors:  Kateřina Švehlová; Michael S Lawrence; Lucie Bednárová; Edward A Curtis
Journal:  Nucleic Acids Res       Date:  2016-10-26       Impact factor: 16.971

Review 5.  Integrating Deoxyribozymes into Colorimetric Sensing Platforms.

Authors:  Dingran Chang; Sandy Zakaria; Mimi Deng; Nicholas Allen; Kha Tram; Yingfu Li
Journal:  Sensors (Basel)       Date:  2016-12-03       Impact factor: 3.576

6.  High specificity and tight spatial restriction of self-biotinylation by DNA and RNA G-Quadruplexes complexed in vitro and in vivo with Heme.

Authors:  Prince Kumar Lat; Kun Liu; Dev N Kumar; Kenneth K L Wong; Esther M Verheyen; Dipankar Sen
Journal:  Nucleic Acids Res       Date:  2020-06-04       Impact factor: 16.971

7.  Investigation and improvement of catalytic activity of G-quadruplex/hemin DNAzymes using designed terminal G-tetrads with deoxyadenosine caps.

Authors:  Yanwei Cao; Pi Ding; Luyan Yang; Wenjing Li; Yu Luo; Jine Wang; Renjun Pei
Journal:  Chem Sci       Date:  2020-06-17       Impact factor: 9.825

8.  Insight into G-quadruplex-hemin DNAzyme/RNAzyme: adjacent adenine as the intramolecular species for remarkable enhancement of enzymatic activity.

Authors:  Wang Li; Yong Li; Zhuoliang Liu; Bin Lin; Haibo Yi; Feng Xu; Zhou Nie; Shouzhuo Yao
Journal:  Nucleic Acids Res       Date:  2016-07-15       Impact factor: 16.971

Review 9.  Specific binding of anionic porphyrin and phthalocyanine to the G-quadruplex with a variety of in vitro and in vivo applications.

Authors:  Hidenobu Yaku; Takashi Murashima; Daisuke Miyoshi; Naoki Sugimoto
Journal:  Molecules       Date:  2012-09-05       Impact factor: 4.411

10.  Comparison of Characteristics and DNAzyme Activity of G4⁻Hemin Conjugates Obtained via Two Hemin Attachment Methods.

Authors:  Joanna Kosman; Krzysztof Żukowski; Bernard Juskowiak
Journal:  Molecules       Date:  2018-06-09       Impact factor: 4.411

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