Literature DB >> 20096560

Spatial aspects of intracellular information processing.

Ali Kinkhabwala1, Philippe I H Bastiaens.   

Abstract

The computational properties of intracellular biochemical networks, for which the cell is assumed to be a 'well-mixed' reactor, have already been widely characterized. What has so far not received systematic treatment is the important role of space in many intracellular computations. Spatial network computations can be divided into two broad categories: those required for essential spatial processes (e.g. polarization, chemotaxis, division, and development) and those for which space is simply used as an extra dimension to expand the computational power of the network. Several pertinent recent examples of each category are discussed that illustrate the often conceptually subtle role of space in the processing of intracellular information. Copyright 2010 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2010        PMID: 20096560     DOI: 10.1016/j.gde.2009.12.006

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  13 in total

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4.  Diffusion Tensor Analysis by Two-Dimensional Pair Correlation of Fluorescence Fluctuations in Cells.

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Journal:  Biophys J       Date:  2016-08-23       Impact factor: 4.033

5.  Visualization of barriers and obstacles to molecular diffusion in live cells by spatial pair-cross-correlation in two dimensions.

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6.  Four-color single-molecule imaging with engineered tags resolves the molecular architecture of signaling complexes in the plasma membrane.

Authors:  Junel Sotolongo Bellón; Oliver Birkholz; Christian P Richter; Florian Eull; Hella Kenneweg; Stephan Wilmes; Ulrich Rothbauer; Changjiang You; Mark R Walter; Rainer Kurre; Jacob Piehler
Journal:  Cell Rep Methods       Date:  2022-02-04

Review 7.  Synthetic mechanobiology: engineering cellular force generation and signaling.

Authors:  Jasmine Hannah Hughes; Sanjay Kumar
Journal:  Curr Opin Biotechnol       Date:  2016-03-26       Impact factor: 9.740

Review 8.  Endocytosis and signaling: cell logistics shape the eukaryotic cell plan.

Authors:  Sara Sigismund; Stefano Confalonieri; Andrea Ciliberto; Simona Polo; Giorgio Scita; Pier Paolo Di Fiore
Journal:  Physiol Rev       Date:  2012-01       Impact factor: 37.312

Review 9.  Exploring the spatial and temporal organization of a cell's proteome.

Authors:  Martin Beck; Maya Topf; Zachary Frazier; Harianto Tjong; Min Xu; Shihua Zhang; Frank Alber
Journal:  J Struct Biol       Date:  2010-11-19       Impact factor: 2.867

10.  Triggering signaling pathways using F-actin self-organization.

Authors:  A Colin; L Bonnemay; C Gayrard; J Gautier; Z Gueroui
Journal:  Sci Rep       Date:  2016-10-04       Impact factor: 4.379

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