Literature DB >> 20091144

Nuclear proteome analysis of monkey embryonic stem cells during differentiation.

Davood Nasrabadi1, Mehran Rezaei Larijani, Ali Fathi, Hamid Gourabi, Ahmad V Dizaj, Hossein Baharvand, Ghasem Hosseini Salekdeh.   

Abstract

The nuclear proteome enables, manages, and regulates the genome by the collective actions and interactions of proteins found in the nucleus. We applied a proteomic approach to analyze a nuclear proteome during embryonic stem cell (ESC) proliferation, and 3 and 9 days after initiation of differentiation. The nuclei were isolated from cells and their proteins were separated using 2-DE. Out of about 560 protein spots reproducible detected on any give gel, 49 differentially expressed proteins were identified by Matrix Assisted Laser Desorption Ionization-Time of Flight (MALDI TOF/TOF) mass spectrometry. Of them, several nuclear located proteins involved in chromatin remodeling, transcription regulation, apoptosis, cell proliferation, and differentiation were identified including CTBP1, MM-1, RUVBL1, HCC-1, SGTA, SUMO2, and Galectin-1. Functional interaction analysis of differentially expressed proteins revealed that most of nuclear proteins had a direct interaction with c-Myc and p53.

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Year:  2010        PMID: 20091144     DOI: 10.1007/s12015-009-9109-6

Source DB:  PubMed          Journal:  Stem Cell Rev Rep        ISSN: 2629-3277            Impact factor:   5.739


  44 in total

1.  An ATPase/helicase complex is an essential cofactor for oncogenic transformation by c-Myc.

Authors:  M A Wood; S B McMahon; M D Cole
Journal:  Mol Cell       Date:  2000-02       Impact factor: 17.970

2.  Coordinated histone modifications mediated by a CtBP co-repressor complex.

Authors:  Yujiang Shi; Jun-ichi Sawada; Guangchao Sui; El Bachir Affar; Johnathan R Whetstine; Fei Lan; Hidesato Ogawa; Margaret Po-Shan Luke; Yoshihiro Nakatani; Yang Shi
Journal:  Nature       Date:  2003-04-17       Impact factor: 49.962

Review 3.  Current two-dimensional electrophoresis technology for proteomics.

Authors:  Angelika Görg; Walter Weiss; Michael J Dunn
Journal:  Proteomics       Date:  2004-12       Impact factor: 3.984

4.  Proteomic signature of human embryonic stem cells.

Authors:  Hossein Baharvand; Mohsen Hajheidari; Saeid Kazemi Ashtiani; Ghasem Hosseini Salekdeh
Journal:  Proteomics       Date:  2006-06       Impact factor: 3.984

Review 5.  The Oscar-worthy role of Myc in apoptosis.

Authors:  Natalie Meyer; Sam S Kim; Linda Z Penn
Journal:  Semin Cancer Biol       Date:  2006-07-14       Impact factor: 15.707

Review 6.  Nuclear proteomics and directed differentiation of embryonic stem cells.

Authors:  Miguel Barthelery; Ugur Salli; Kent E Vrana
Journal:  Stem Cells Dev       Date:  2007-12       Impact factor: 3.272

7.  Inducible and reversible suppression of Npm1 gene expression using stably integrated small interfering RNA vector in mouse embryonic stem cells.

Authors:  Bei Bei Wang; Rui Lu; Wei Cheng Wang; Ying Jin
Journal:  Biochem Biophys Res Commun       Date:  2006-07-14       Impact factor: 3.575

8.  Identification of a novel cellular TPR-containing protein, SGT, that interacts with the nonstructural protein NS1 of parvovirus H-1.

Authors:  C Cziepluch; E Kordes; R Poirey; A Grewenig; J Rommelaere; J C Jauniaux
Journal:  J Virol       Date:  1998-05       Impact factor: 5.103

9.  Chromatin-related proteins in pluripotent mouse embryonic stem cells are downregulated after removal of leukemia inhibitory factor.

Authors:  Akira Kurisaki; Tatsuo S Hamazaki; Koji Okabayashi; Tetsuo Iida; Tsutomu Nishine; Ritsu Chonan; Hiroshi Kido; Susumu Tsunasawa; Osamu Nishimura; Makoto Asashima; Hiromu Sugino
Journal:  Biochem Biophys Res Commun       Date:  2005-09-30       Impact factor: 3.575

10.  Nucleophosmin interacts directly with c-Myc and controls c-Myc-induced hyperproliferation and transformation.

Authors:  Zhaoliang Li; David Boone; Stephen R Hann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-24       Impact factor: 11.205

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  4 in total

Review 1.  Proteomic analysis of stem cell differentiation and early development.

Authors:  Dennis van Hoof; Jeroen Krijgsveld; Christine Mummery
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-03-01       Impact factor: 10.005

2.  Downregulation of RUVBL1 inhibits proliferation of lung adenocarcinoma cells by G1/S phase cell cycle arrest via multiple mechanisms.

Authors:  Xiao-Shuai Yuan; Zhi-Tian Wang; Ye-Ji Hu; Fei-Chao Bao; Ping Yuan; Chong Zhang; Jin-Lin Cao; Wang Lv; Jian Hu
Journal:  Tumour Biol       Date:  2016-10-10

3.  Subnuclear domain proteins in cancer cells support the functions of RUNX2 in the DNA damage response.

Authors:  Seungchan Yang; Alexandre J C Quaresma; Jeffrey A Nickerson; Karin M Green; Scott A Shaffer; Anthony N Imbalzano; Lori A Martin-Buley; Jane B Lian; Janet L Stein; Andre J van Wijnen; Gary S Stein
Journal:  J Cell Sci       Date:  2015-01-20       Impact factor: 5.285

4.  Comprehensive nuclear proteome of Arabidopsis obtained by sequential extraction.

Authors:  Chieko Goto; Shoko Hashizume; Yoichiro Fukao; Ikuko Hara-Nishimura; Kentaro Tamura
Journal:  Nucleus       Date:  2019-12       Impact factor: 4.197

  4 in total

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