Literature DB >> 20090972

The reversible macrocyclization of Tyrocidine A aldehyde: a hemiaminal reminiscent of the tetrahedral intermediate of macrolactamization.

Sebastian Enck1, Florian Kopp, Mohamed A Marahiel, Armin Geyer.   

Abstract

In spite of the important role of peptide macrocyclizations for the generation of conformationally constrained biological ligands, our knowledge of factors that determine the inclination of a substrate to cyclize is low. Therefore, methods that give access to the thermodynamic characterization of these processes are desirable. In this work, we present the isosteric substitution of the amide ligation site of a cyclopeptide by an imine. Applied to the decapeptide antibiotic Tyrocidine A (TycA), the reversible cyclization of the linear aldehyde TycA-CHO resulted in the unexpectedly stable hemiaminal Psi[CH(OH)NH]-TycA, which is equivalent to the tetrahedral intermediate of macrolactamization, and which is observed for the first time in a peptidic structure. On the basis of NMR spectroscopy and molecular modeling, we discuss the observed high stereoselectivity of hemiaminal formation, as well as its reluctance to be dehydrated to the imine. As required for thermodynamic analysis, it is possible to establish a pH- and temperature-dependent cyclization equilibrium, which allows determination of the entropy loss of the peptide chain, and quantification of the extent of preorientation of the cyclization precursor.

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Year:  2009        PMID: 20090972     DOI: 10.1039/b917549k

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  5 in total

1.  Proximity effects in nucleophilic addition reactions to medium-bridged twisted lactams: remarkably stable tetrahedral intermediates.

Authors:  Michal Szostak; Lei Yao; Jeffrey Aubé
Journal:  J Am Chem Soc       Date:  2010-02-17       Impact factor: 15.419

2.  Peptide Macrocyclization Inspired by Non-Ribosomal Imine Natural Products.

Authors:  Lara R Malins; Justine N deGruyter; Kevin J Robbins; Paul M Scola; Martin D Eastgate; M Reza Ghadiri; Phil S Baran
Journal:  J Am Chem Soc       Date:  2017-03-31       Impact factor: 15.419

Review 3.  Synthesis of novel cyclopeptides containing heterocyclic skeletons.

Authors:  Fatima Hamdan; Fatemeh Tahoori; Saeed Balalaie
Journal:  RSC Adv       Date:  2018-10-03       Impact factor: 4.036

4.  Assembly of synthetic Aβ miniamyloids on polyol templates.

Authors:  Sebastian Nils Fischer; Armin Geyer
Journal:  Beilstein J Org Chem       Date:  2015-12-17       Impact factor: 2.883

5.  Synthetic Lugdunin Analogues Reveal Essential Structural Motifs for Antimicrobial Action and Proton Translocation Capability.

Authors:  Nadine A Schilling; Anne Berscheid; Johannes Schumacher; Julian S Saur; Martin C Konnerth; Sebastian N Wirtz; José M Beltrán-Beleña; Alexander Zipperer; Bernhard Krismer; Andreas Peschel; Hubert Kalbacher; Heike Brötz-Oesterhelt; Claudia Steinem; Stephanie Grond
Journal:  Angew Chem Int Ed Engl       Date:  2019-05-27       Impact factor: 15.336

  5 in total

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