Literature DB >> 20081216

Ionomics: The functional genomics of elements.

Ivan Baxter1.   

Abstract

Ionomics is the study of elemental accumulation in living systems using high-throughput elemental profiling. This approach has been applied extensively in plants for forward and reverse genetics, screening diversity panels, and modeling of physiological states. In this review, I will discuss some of the advantages and limitations of the ionomics approach as well as the important parameters to consider when designing ionomics experiments, and how to evaluate ionomics data.

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Year:  2010        PMID： 20081216     DOI： 10.1093/bfgp/elp055

Source DB:  PubMed          Journal:  Brief Funct Genomics        ISSN： 2041-2649            Impact factor:   4.241


  27 in total

Review 1.  Genetics- and genomics-based interventions for nutritional enhancement of grain legume crops: status and outlook.

Authors:  Abhishek Bohra; Kanwar L Sahrawat; Shiv Kumar; Rohit Joshi; Ashok K Parihar; Ummed Singh; Deepak Singh; Narendra P Singh
Journal:  J Appl Genet       Date:  2015-01-16       Impact factor: 3.240

2.  Integrating Coexpression Networks with GWAS to Prioritize Causal Genes in Maize.

Authors:  Robert J Schaefer; Jean-Michel Michno; Joseph Jeffers; Owen Hoekenga; Brian Dilkes; Ivan Baxter; Chad L Myers
Journal:  Plant Cell       Date:  2018-11-09       Impact factor: 11.277

3.  Chloroplast 2010: a database for large-scale phenotypic screening of Arabidopsis mutants.

Authors:  Yan Lu; Linda J Savage; Matthew D Larson; Curtis G Wilkerson; Robert L Last
Journal:  Plant Physiol       Date:  2011-01-11       Impact factor: 8.340

4.  A revised mineral nutrient supplement increases biomass and growth rate in Chlamydomonas reinhardtii.

Authors:  Janette Kropat; Anne Hong-Hermesdorf; David Casero; Petr Ent; Madeli Castruita; Matteo Pellegrini; Sabeeha S Merchant; Davin Malasarn
Journal:  Plant J       Date:  2011-03-21       Impact factor: 6.417

5.  Multi-dimensional leaf phenotypes reflect root system genotype in grafted grapevine over the growing season.

Authors:  Zachary N Harris; Mani Awale; Niyati Bhakta; Daniel H Chitwood; Anne Fennell; Emma Frawley; Laura L Klein; Laszlo G Kovacs; Misha Kwasniewski; Jason P Londo; Qin Ma; Zoë Migicovsky; Joel F Swift; Allison J Miller
Journal:  Gigascience       Date:  2021-12-29       Impact factor: 6.524

6.  Biodiversity of mineral nutrient and trace element accumulation in Arabidopsis thaliana.

Authors:  Ivan Baxter; Christian Hermans; Brett Lahner; Elena Yakubova; Marina Tikhonova; Nathalie Verbruggen; Dai-Yin Chao; David E Salt
Journal:  PLoS One       Date:  2012-04-27       Impact factor: 3.240

7.  Testing the ecological consequences of evolutionary change using elements.

Authors:  Punidan D Jeyasingh; Rickey D Cothran; Michael Tobler
Journal:  Ecol Evol       Date:  2014-01-15       Impact factor: 2.912

8.  Elemental concentrations in the seed of mutants and natural variants of Arabidopsis thaliana grown under varying soil conditions.

Authors:  Stephen C McDowell; Garo Akmakjian; Chris Sladek; David Mendoza-Cozatl; Joe B Morrissey; Nick Saini; Ron Mittler; Ivan Baxter; David E Salt; John M Ward; Julian I Schroeder; Mary Lou Guerinot; Jeffrey F Harper
Journal:  PLoS One       Date:  2013-05-06       Impact factor: 3.240

9.  High bioavailability iron maize (Zea mays L.) developed through molecular breeding provides more absorbable iron in vitro (Caco-2 model) and in vivo (Gallus gallus).

Authors:  Elad Tako; Owen A Hoekenga; Leon V Kochian; Raymond P Glahn
Journal:  Nutr J       Date:  2013-01-04       Impact factor: 3.271

Review 10.  Proteomics, metabolomics, and ionomics perspectives of salinity tolerance in halophytes.

Authors:  Asha Kumari; Paromita Das; Asish Kumar Parida; Pradeep K Agarwal
Journal:  Front Plant Sci       Date:  2015-07-29       Impact factor: 5.753
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