Literature DB >> 20081025

Microbacterium ginsengiterrae sp. nov., a beta-glucosidase-producing bacterium isolated from soil of a ginseng field.

Yeon-Ju Kim1, Myung Kyum Kim1, Thi Phuong Nam Bui1, Ho-Bin Kim1, Sathiyaraj Srinivasan1, Deok-Chun Yang1.   

Abstract

Strain DCY37(T) was isolated from a soil sample of a ginseng field in the Republic of Korea and characterized in order to determine its taxonomic position. Cells were Gram-staining-positive, heterotrophic, strictly aerobic, non-motile short rods. 16S rRNA gene sequence analysis revealed that strain DCY37(T) belongs to the genus Microbacterium. According to 16S rRNA gene sequence analysis, it is closely related to Microbacterium aerolatum DSM 14217(T) (98.8 %), Microbacterium hydrocarbonoxydans DSM 16089(T) (98.5 %), Microbacterium natoriense JCM 12611(T) (98.5 %), Microbacterium foliorum (98.4 %) and Microbacterium phyllosphaerae (98.3 %). However, DNA-DNA hybridization studies showed reassociation values of less than 70 % between representative strains and DCY37(T). The DNA G+C content was 64.5 mol%. Strain DCY37(T) possessed chemotaxonomic markers that were consistent with classification in the genus Microbacterium, i.e. MK-12 and MK-13 as the major menaquinones and anteiso-C(15 : 0), anteiso-C(17 : 0) and iso-C(16 : 0) as the predominant cellular fatty acids. The major cell wall sugars were ribose, xylose and galactose. The diamino acid in cell-wall hydrolysates of strain DCY37(T) was ornithine and major cell-wall amino acids were alanine, glycine, d-glutamic acid and serine. The major polar lipids were glycolipid, phosphatidylglycerol, diphosphatidylglycerol and unknown aminolipids. Based on these data, DCY37(T) (=KCTC 19526(T) =JCM 15516(T)) should be classified as the type strain of a novel species of the genus Microbacterium, for which the name Microbacterium ginsengiterrae sp. nov. is proposed.

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Year:  2010        PMID: 20081025     DOI: 10.1099/ijs.0.015784-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Study on encapsulation of chlorine dioxide in gelatin microsphere for reducing release rate.

Authors:  Ying Ci; Lin Wang; Yanchuan Guo; Ruixue Sun; Xijie Wang; Jinyou Li
Journal:  Int J Clin Exp Med       Date:  2015-08-15

2.  Macroalga-Derived Alginate Oligosaccharide Alters Intestinal Bacteria of Atlantic Salmon.

Authors:  Shruti Gupta; Jep Lokesh; Yousri Abdelhafiz; Prabhugouda Siriyappagouder; Ronan Pierre; Mette Sørensen; Jorge M O Fernandes; Viswanath Kiron
Journal:  Front Microbiol       Date:  2019-09-13       Impact factor: 5.640

3.  A rapid and efficient method for the extraction and identification of menaquinones from Actinomycetes in wet biomass.

Authors:  Fuquan Xie; Shengxiang Pei; Xihuang Lin; Yun Tian; Gaiyun Zhang
Journal:  BMC Microbiol       Date:  2021-06-09       Impact factor: 3.605

  3 in total

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