Literature DB >> 20074182

Bayesian structural equation models for inferring relationships between phenotypes: a review of methodology, identifiability, and applications.

Xiao-Lin Wu1, Bjørg Heringstad, Daniel Gianola.   

Abstract

Structural equation models provide a general statistical modelling technique for estimating and testing relationships among variables. Such relationships are often not revealed by standard linear models, but are of importance for understanding mechanisms underlying e.g., production-related diseases, such as mastitis. This paper gives a review of Bayesian structural equation models concerning methodology and identifiability, focused on animal breeding and genetics modelling. Applications of this type of methods in animal breeding are also reviewed critically, with discussion on advantages and disadvantages of these approaches.

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Year:  2010        PMID: 20074182     DOI: 10.1111/j.1439-0388.2009.00835.x

Source DB:  PubMed          Journal:  J Anim Breed Genet        ISSN: 0931-2668            Impact factor:   2.380


  15 in total

1.  Searching for recursive causal structures in multivariate quantitative genetics mixed models.

Authors:  Bruno D Valente; Guilherme J M Rosa; Gustavo de Los Campos; Daniel Gianola; Martinho A Silva
Journal:  Genetics       Date:  2010-03-29       Impact factor: 4.562

2.  The Causal Meaning of Genomic Predictors and How It Affects Construction and Comparison of Genome-Enabled Selection Models.

Authors:  Bruno D Valente; Gota Morota; Francisco Peñagaricano; Daniel Gianola; Kent Weigel; Guilherme J M Rosa
Journal:  Genetics       Date:  2015-04-23       Impact factor: 4.562

Review 3.  Conceptual framework for investigating causal effects from observational data in livestock.

Authors:  Nora M Bello; Vera C Ferreira; Daniel Gianola; Guilherme J M Rosa
Journal:  J Anim Sci       Date:  2018-09-29       Impact factor: 3.159

4.  Is structural equation modeling advantageous for the genetic improvement of multiple traits?

Authors:  Bruno D Valente; Guilherme J M Rosa; Daniel Gianola; Xiao-Lin Wu; Kent Weigel
Journal:  Genetics       Date:  2013-04-22       Impact factor: 4.562

5.  Simultaneous estimation of multiple quantitative trait loci and growth curve parameters through hierarchical Bayesian modeling.

Authors:  M J Sillanpää; P Pikkuhookana; S Abrahamsson; T Knürr; A Fries; E Lerceteau; P Waldmann; M R García-Gil
Journal:  Heredity (Edinb)       Date:  2011-07-27       Impact factor: 3.821

6.  Inferring causal phenotype networks using structural equation models.

Authors:  Guilherme J M Rosa; Bruno D Valente; Gustavo de los Campos; Xiao-Lin Wu; Daniel Gianola; Martinho A Silva
Journal:  Genet Sel Evol       Date:  2011-02-10       Impact factor: 4.297

7.  Causal relationships between milk quality and coagulation properties in Italian Holstein-Friesian dairy cattle.

Authors:  Francesco Tiezzi; Bruno D Valente; Martino Cassandro; Christian Maltecca
Journal:  Genet Sel Evol       Date:  2015-05-13       Impact factor: 4.297

8.  Uncovering a Nuisance Influence of a Phenological Trait of Plants Using a Nonlinear Structural Equation: Application to Days to Heading and Culm Length in Asian Cultivated Rice (Oryza Sativa L.).

Authors:  Akio Onogi; Osamu Ideta; Takuma Yoshioka; Kaworu Ebana; Masanori Yamasaki; Hiroyoshi Iwata
Journal:  PLoS One       Date:  2016-02-09       Impact factor: 3.240

9.  Inference of gene regulatory networks with sparse structural equation models exploiting genetic perturbations.

Authors:  Xiaodong Cai; Juan Andrés Bazerque; Georgios B Giannakis
Journal:  PLoS Comput Biol       Date:  2013-05-23       Impact factor: 4.475

10.  Including Phenotypic Causal Networks in Genome-Wide Association Studies Using Mixed Effects Structural Equation Models.

Authors:  Mehdi Momen; Ahmad Ayatollahi Mehrgardi; Mahmoud Amiri Roudbar; Andreas Kranis; Renan Mercuri Pinto; Bruno D Valente; Gota Morota; Guilherme J M Rosa; Daniel Gianola
Journal:  Front Genet       Date:  2018-10-09       Impact factor: 4.599

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