Literature DB >> 20071555

16S rRNA gene sequencing in routine identification of anaerobic bacteria isolated from blood cultures.

Ulrik Stenz Justesen1, Marianne Nielsine Skov, Elisa Knudsen, Hanne Marie Holt, Per Søgaard, Tage Justesen.   

Abstract

A comparison between conventional identification and 16S rRNA gene sequencing of anaerobic bacteria isolated from blood cultures in a routine setting was performed (n = 127). With sequencing, 89% were identified to the species level, versus 52% with conventional identification. The times for identification were 1.5 days and 2.8 days, respectively.

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Year:  2010        PMID： 20071555      PMCID： PMC2832449          DOI： 10.1128/JCM.02075-09

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  15 in total

1.  16S ribosomal DNA sequence-based analysis of clinically significant gram-positive anaerobic cocci.

Authors:  Yuli Song; Chengxu Liu; Maureen McTeague; Sydney M Finegold
Journal:  J Clin Microbiol       Date:  2003-04       Impact factor: 5.948

2.  Clinical impact associated with corrected results in clinical microbiology testing.

Authors:  Shan Yuan; Michael L Astion; Jeff Schapiro; Ajit P Limaye
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3.  EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences.

Authors:  Jongsik Chun; Jae-Hak Lee; Yoonyoung Jung; Myungjin Kim; Seil Kim; Byung Kwon Kim; Young-Woon Lim
Journal:  Int J Syst Evol Microbiol       Date:  2007-10       Impact factor: 2.747

4.  Evaluation of the new Vitek 2 ANC card for identification of medically relevant anaerobic bacteria.

Authors:  Francine Mory; Corentine Alauzet; Céline Matuszeswski; Philippe Riegel; Alain Lozniewski
Journal:  J Clin Microbiol       Date:  2009-04-22       Impact factor: 5.948

5.  Robinsoniella peoriensis gen. nov., sp. nov., isolated from a swine-manure storage pit and a human clinical source.

Authors:  Michael A Cotta; Terence R Whitehead; Enevold Falsen; Edward Moore; Paul A Lawson
Journal:  Int J Syst Evol Microbiol       Date:  2009-01       Impact factor: 2.747

6.  The role of 16S rRNA gene sequencing in identification of microorganisms misidentified by conventional methods.

Authors:  C A Petti; C R Polage; P Schreckenberger
Journal:  J Clin Microbiol       Date:  2005-12       Impact factor: 5.948

7.  Anaerobic, non-sporulating, Gram-positive bacilli bacteraemia characterized by 16S rRNA gene sequencing.

Authors:  Susanna Kp Lau; Patrick Cy Woo; Ami My Fung; King-Man Chan; Gibson Ks Woo; Kwok-Yung Yuen
Journal:  J Med Microbiol       Date:  2004-12       Impact factor: 2.472

8.  Diversity of bacterial populations on the tongue dorsa of patients with halitosis and healthy patients.

Authors:  C E Kazor; P M Mitchell; A M Lee; L N Stokes; W J Loesche; F E Dewhirst; B J Paster
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

9.  Systematic 16S rRNA gene sequencing of atypical clinical isolates identified 27 new bacterial species associated with humans.

Authors:  M Drancourt; P Berger; D Raoult
Journal:  J Clin Microbiol       Date:  2004-05       Impact factor: 5.948

10.  Genotypic diversity of anaerobic isolates from bloodstream infections.

Authors:  Keith E Simmon; Stanley Mirrett; L Barth Reller; Cathy A Petti
Journal:  J Clin Microbiol       Date:  2008-03-05       Impact factor: 5.948
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  17 in total

1.  Species identification of clinical isolates of anaerobic bacteria: a comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry systems.

Authors:  Ulrik Stenz Justesen; Anette Holm; Elisa Knudsen; Line Bisgaard Andersen; Thøger Gorm Jensen; Michael Kemp; Marianne Nielsine Skov; Bente Gahrn-Hansen; Jens Kjølseth Møller
Journal:  J Clin Microbiol       Date:  2011-10-12       Impact factor: 5.948

2.  Two Serious Cases of Infection with Clostridium celatum after 40 Years in Hiding?

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Journal:  J Clin Microbiol       Date:  2015-11-11       Impact factor: 5.948

3.  Identification of nasal colonization with β-lactamase-producing Enterobacteriaceae in patients, health care workers and students in Madagascar.

Authors:  Volker Micheel; Benedikt Hogan; Rivo Andry Rakotoarivelo; Raphael Rakotozandrindrainy; Fetra Razafimanatsoa; Tsiriniaina Razafindrabe; Jean Philibert Rakotondrainiarivelo; Sabine Crusius; Sven Poppert; Norbert Georg Schwarz; Jürgen May; Hagen Frickmann; Ralf Matthias Hagen
Journal:  Eur J Microbiol Immunol (Bp)       Date:  2015-03-26

4.  Advancement in the routine identification of anaerobic bacteria by MALDI-TOF mass spectrometry.

Authors:  L Coltella; L Mancinelli; M Onori; B Lucignano; D Menichella; R Sorge; M Raponi; R Mancini; C Russo
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2013-04-14       Impact factor: 3.267

5.  Four cases of bacteremia caused by Oscillibacter ruminantium, a newly described species.

Authors:  Thomas V Sydenham; Magnus Arpi; Kasper Klein; Ulrik S Justesen
Journal:  J Clin Microbiol       Date:  2014-02-05       Impact factor: 5.948

6.  Endocarditis of the native aortic valve caused by Lactobacillus jensenii.

Authors:  Soumya Patnaik; Carlos Daniel Davila; Anupama Chennupati; Alexander Rubin
Journal:  BMJ Case Rep       Date:  2015-03-06

7.  Leptotrichia bacteremia in patients receiving high-dose chemotherapy.

Authors:  Marc Roger Couturier; E Susan Slechta; Claudia Goulston; Mark A Fisher; Kimberly E Hanson
Journal:  J Clin Microbiol       Date:  2012-01-11       Impact factor: 5.948

8.  Solobacterium moorei bacteremia: identification, antimicrobial susceptibility, and clinical characteristics.

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Journal:  J Clin Microbiol       Date:  2011-04-27       Impact factor: 5.948

9.  Two cases of Ruminococcus gnavus bacteremia associated with diverticulitis.

Authors:  Sanne G K Hansen; Marianne N Skov; Ulrik S Justesen
Journal:  J Clin Microbiol       Date:  2013-01-30       Impact factor: 5.948

10.  Rapid discrimination of Haemophilus influenzae, H. parainfluenzae, and H. haemolyticus by fluorescence in situ hybridization (FISH) and two matrix-assisted laser-desorption-ionization time-of-flight mass spectrometry (MALDI-TOF-MS) platforms.

Authors:  Hagen Frickmann; Martin Christner; Martina Donat; Anja Berger; Andreas Essig; Andreas Podbielski; Ralf Matthias Hagen; Sven Poppert
Journal:  PLoS One       Date:  2013-04-30       Impact factor: 3.240
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