Literature DB >> 20070856

Computational modeling of dendritic tiling by diffusible extracellular suppressor.

Kohei Shimono1, Kaoru Sugimura, Mineko Kengaku, Tadashi Uemura, Atsushi Mochizuki.   

Abstract

The development of neuronal class-specific dendrites is a basis for the correct functioning of the nervous system. For instance, tiling of dendritic arbors (complete, but minimum-overlapping innervation of a field) supports uniform reception of input stimuli. Previous studies have attempted to show the molecular and cellular basis of tiling, and it has been argued that the underlying inhibitory interaction between dendrites is realized by contact-dependent retraction and/or by repulsion of dendrites via extracellular branch suppressors. In this study, we showed that the development and regeneration of the tiling pattern could be reproduced by two different mathematical models (the cell compartment model and the end capped-segment model), in both of which dendrite growth is coupled with the dynamics of an extracellular suppressor that is secreted from dendrites. The analysis of the end capped-segment model in three-dimensional space showed that it generated both non-overlapping arbors as well as overlapping dendritic arbors, which patterns are reminiscent of phenotypes of previously reported tiling mutants in vivo. Moreover, the results of our numerical analysis of the 2 models suggest that tiling patterns could be achieved either by a local increase in the concentration of an intracellular branching activator or by a local decrease in the production of a suppressor at branch ends.

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Year:  2010        PMID: 20070856     DOI: 10.1111/j.1365-2443.2009.01367.x

Source DB:  PubMed          Journal:  Genes Cells        ISSN: 1356-9597            Impact factor:   1.891


  5 in total

1.  The seven-pass transmembrane cadherin Flamingo controls dendritic self-avoidance via its binding to a LIM domain protein, Espinas, in Drosophila sensory neurons.

Authors:  Daisuke Matsubara; Shin-Ya Horiuchi; Kohei Shimono; Tadao Usui; Tadashi Uemura
Journal:  Genes Dev       Date:  2011-09-15       Impact factor: 11.361

2.  Principles of branch dynamics governing shape characteristics of cerebellar Purkinje cell dendrites.

Authors:  Kazuto Fujishima; Ryota Horie; Atsushi Mochizuki; Mineko Kengaku
Journal:  Development       Date:  2012-09       Impact factor: 6.868

3.  Self-referential forces are sufficient to explain different dendritic morphologies.

Authors:  Heraldo Memelli; Benjamin Torben-Nielsen; James Kozloski
Journal:  Front Neuroinform       Date:  2013-01-30       Impact factor: 4.081

4.  An evolutionarily conserved protein CHORD regulates scaling of dendritic arbors with body size.

Authors:  Kohei Shimono; Kazuto Fujishima; Takafumi Nomura; Masayoshi Ohashi; Tadao Usui; Mineko Kengaku; Atsushi Toyoda; Tadashi Uemura
Journal:  Sci Rep       Date:  2014-03-19       Impact factor: 4.379

5.  Stochastic Modeling of Radiation-induced Dendritic Damage on in silico Mouse Hippocampal Neurons.

Authors:  Eliedonna Cacao; Vipan K Parihar; Charles L Limoli; Francis A Cucinotta
Journal:  Sci Rep       Date:  2018-04-03       Impact factor: 4.379

  5 in total

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