Literature DB >> 20067403

Characteristics of pattern formation and evolution in approximations of Physarum transport networks.

Jeff Jones1.   

Abstract

Most studies of pattern formation place particular emphasis on its role in the development of complex multicellular body plans. In simpler organisms, however, pattern formation is intrinsic to growth and behavior. Inspired by one such organism, the true slime mold Physarum polycephalum, we present examples of complex emergent pattern formation and evolution formed by a population of simple particle-like agents. Using simple local behaviors based on chemotaxis, the mobile agent population spontaneously forms complex and dynamic transport networks. By adjusting simple model parameters, maps of characteristic patterning are obtained. Certain areas of the parameter mapping yield particularly complex long term behaviors, including the circular contraction of network lacunae and bifurcation of network paths to maintain network connectivity. We demonstrate the formation of irregular spots and labyrinthine and reticulated patterns by chemoattraction. Other Turing-like patterning schemes were obtained by using chemorepulsion behaviors, including the self-organization of regular periodic arrays of spots, and striped patterns. We show that complex pattern types can be produced without resorting to the hierarchical coupling of reaction-diffusion mechanisms. We also present network behaviors arising from simple pre-patterning cues, giving simple examples of how the emergent pattern formation processes evolve into networks with functional and quasi-physical properties including tensionlike effects, network minimization behavior, and repair to network damage. The results are interpreted in relation to classical theories of biological pattern formation in natural systems, and we suggest mechanisms by which emergent pattern formation processes may be used as a method for spatially represented unconventional computation.

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Year:  2010        PMID: 20067403     DOI: 10.1162/artl.2010.16.2.16202

Source DB:  PubMed          Journal:  Artif Life        ISSN: 1064-5462            Impact factor:   0.667


  6 in total

1.  Cooperation in Harsh Environments and the Emergence of Spatial Patterns.

Authors:  Paul E Smaldino
Journal:  Chaos Solitons Fractals       Date:  2013-11       Impact factor: 5.944

2.  Kanizsa illusory contours appearing in the plasmodium pattern of Physarum polycephalum.

Authors:  Iori Tani; Masaki Yamachiyo; Tomohiro Shirakawa; Yukio-Pegio Gunji
Journal:  Front Cell Infect Microbiol       Date:  2014-02-28       Impact factor: 5.293

3.  How a life-like system emerges from a simple particle motion law.

Authors:  Thomas Schmickl; Martin Stefanec; Karl Crailsheim
Journal:  Sci Rep       Date:  2016-11-30       Impact factor: 4.379

4.  Biological network growth in complex environments: A computational framework.

Authors:  Torsten Johann Paul; Philip Kollmannsberger
Journal:  PLoS Comput Biol       Date:  2020-11-30       Impact factor: 4.475

5.  Towards a Physarum learning chip.

Authors:  James G H Whiting; Jeff Jones; Larry Bull; Michael Levin; Andrew Adamatzky
Journal:  Sci Rep       Date:  2016-02-03       Impact factor: 4.379

6.  Substrate composition directs slime molds behavior.

Authors:  Fernando Patino-Ramirez; Aurèle Boussard; Chloé Arson; Audrey Dussutour
Journal:  Sci Rep       Date:  2019-10-28       Impact factor: 4.379

  6 in total

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