Literature DB >> 20061480

Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria.

Christiane Steinweg1, Carsten T Kuenne, André Billion, Mobarak A Mraheil, Eugen Domann, Rohit Ghai, Sukhadeo B Barbuddhe, Uwe Kärst, Alexander Goesmann, Alfred Pühler, Bernd Weisshaar, Jürgen Wehland, Robert Lampidis, Jürgen Kreft, Werner Goebel, Trinad Chakraborty, Torsten Hain.   

Abstract

We report the complete and annotated genome sequence of the nonpathogenic Listeria seeligeri SLCC3954 serovar 1/2b type strain harboring the smallest completely sequenced genome of the genus Listeria.

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Year:  2010        PMID： 20061480      PMCID： PMC2820865          DOI： 10.1128/JB.01415-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  13 in total

1.  MAVID: constrained ancestral alignment of multiple sequences.

Authors:  Nicolas Bray; Lior Pachter
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

2.  Base-calling of automated sequencer traces using phred. I. Accuracy assessment.

Authors:  B Ewing; L Hillier; M C Wendl; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

3.  Consed: a graphical tool for sequence finishing.

Authors:  D Gordon; C Abajian; P Green
Journal:  Genome Res       Date:  1998-03       Impact factor: 9.043

4.  Comparison of PCR-based DNA fingerprinting techniques for the identification of Listeria species and their use for atypical Listeria isolates.

Authors:  M Vaneechoutte; P Boerlin; H V Tichy; E Bannerman; B Jäger; J Bille
Journal:  Int J Syst Bacteriol       Date:  1998-01

5.  Comparative analysis of 16S and 23S rRNA sequences of Listeria species.

Authors:  B Sallen; A Rajoharison; S Desvarenne; F Quinn; C Mabilat
Journal:  Int J Syst Bacteriol       Date:  1996-07

6.  Listeria marthii sp. nov., isolated from the natural environment, Finger Lakes National Forest.

Authors:  Lewis M Graves; Leta O Helsel; Arnold G Steigerwalt; Roger E Morey; Maryam I Daneshvar; Sherry E Roof; Renato H Orsi; Esther D Fortes; Sara R Milillo; Henk C den Bakker; Martin Wiedmann; Balasubramanian Swaminathan; Brian D Sauders
Journal:  Int J Syst Evol Microbiol       Date:  2009-08-10       Impact factor: 2.747

7.  Phylogenetic analysis of the genus Listeria based on reverse transcriptase sequencing of 16S rRNA.

Authors:  M D Collins; S Wallbanks; D J Lane; J Shah; R Nietupski; J Smida; M Dorsch; E Stackebrandt
Journal:  Int J Syst Bacteriol       Date:  1991-04

8.  Comparative genomics of Listeria species.

Authors:  P Glaser; L Frangeul; C Buchrieser; C Rusniok; A Amend; F Baquero; P Berche; H Bloecker; P Brandt; T Chakraborty; A Charbit; F Chetouani; E Couvé; A de Daruvar; P Dehoux; E Domann; G Domínguez-Bernal; E Duchaud; L Durant; O Dussurget; K D Entian; H Fsihi; F García-del Portillo; P Garrido; L Gautier; W Goebel; N Gómez-López; T Hain; J Hauf; D Jackson; L M Jones; U Kaerst; J Kreft; M Kuhn; F Kunst; G Kurapkat; E Madueno; A Maitournam; J M Vicente; E Ng; H Nedjari; G Nordsiek; S Novella; B de Pablos; J C Pérez-Diaz; R Purcell; B Remmel; M Rose; T Schlueter; N Simoes; A Tierrez; J A Vázquez-Boland; H Voss; J Wehland; P Cossart
Journal:  Science       Date:  2001-10-26       Impact factor: 47.728

9.  The COG database: new developments in phylogenetic classification of proteins from complete genomes.

Authors:  R L Tatusov; D A Natale; I V Garkavtsev; T A Tatusova; U T Shankavaram; B S Rao; B Kiryutin; M Y Galperin; N D Fedorova; E V Koonin
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

10.  Evolutionary history of the genus Listeria and its virulence genes.

Authors:  Michael W Schmid; Eva Y W Ng; Robert Lampidis; Melanie Emmerth; Marion Walcher; Jürgen Kreft; Werner Goebel; Michael Wagner; Karl-Heinz Schleifer
Journal:  Syst Appl Microbiol       Date:  2005-01       Impact factor: 4.022
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  13 in total

1.  Anti-Listeria activities of Galleria mellonella hemolymph proteins.

Authors:  Krishnendu Mukherjee; Mobarak Abu Mraheil; Silke Silva; Daniela Müller; Franz Cemic; Jürgen Hemberger; Torsten Hain; Andreas Vilcinskas; Trinad Chakraborty
Journal:  Appl Environ Microbiol       Date:  2011-04-29       Impact factor: 4.792

2.  Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7.

Authors:  Jianshun Chen; Ye Xia; Changyong Cheng; Chun Fang; Ying Shan; Gulei Jin; Weihuan Fang
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

3.  FSL J1-208, a virulent uncommon phylogenetic lineage IV Listeria monocytogenes strain with a small chromosome size and a putative virulence plasmid carrying internalin-like genes.

Authors:  Henk C den Bakker; Barbara M Bowen; Lorraine D Rodriguez-Rivera; Martin Wiedmann
Journal:  Appl Environ Microbiol       Date:  2012-01-13       Impact factor: 4.792

4.  Complementation of Listeria monocytogenes null mutants with selected Listeria seeligeri virulence genes suggests functional adaptation of Hly and PrfA and considerable diversification of prfA regulation in L. seeligeri.

Authors:  Courtney R Lucas Stelling; Renato H Orsi; Martin Wiedmann
Journal:  Appl Environ Microbiol       Date:  2010-06-11       Impact factor: 4.792

5.  Probing the pan-genome of Listeria monocytogenes: new insights into intraspecific niche expansion and genomic diversification.

Authors:  Xiangyu Deng; Adam M Phillippy; Zengxin Li; Steven L Salzberg; Wei Zhang
Journal:  BMC Genomics       Date:  2010-09-16       Impact factor: 3.969

6.  Comparative analysis of plasmids in the genus Listeria.

Authors:  Carsten Kuenne; Sonja Voget; Jordan Pischimarov; Sebastian Oehm; Alexander Goesmann; Rolf Daniel; Torsten Hain; Trinad Chakraborty
Journal:  PLoS One       Date:  2010-09-02       Impact factor: 3.240

Review 7.  Illuminating the landscape of host-pathogen interactions with the bacterium Listeria monocytogenes.

Authors:  Pascale Cossart
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-23       Impact factor: 11.205

8.  Evolutionary dynamics of the accessory genome of Listeria monocytogenes.

Authors:  Henk C den Bakker; Christopher A Desjardins; Allison D Griggs; Joseph E Peters; Qiandong Zeng; Sarah K Young; Chinnappa D Kodira; Chandri Yandava; Theresa A Hepburn; Brian J Haas; Bruce W Birren; Martin Wiedmann
Journal:  PLoS One       Date:  2013-06-25       Impact factor: 3.240

9.  Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss.

Authors:  Henk C den Bakker; Craig A Cummings; Vania Ferreira; Paolo Vatta; Renato H Orsi; Lovorka Degoricija; Melissa Barker; Olga Petrauskene; Manohar R Furtado; Martin Wiedmann
Journal:  BMC Genomics       Date:  2010-12-02       Impact factor: 3.969

10.  The intracellular sRNA transcriptome of Listeria monocytogenes during growth in macrophages.

Authors:  Mobarak A Mraheil; André Billion; Walid Mohamed; Krishnendu Mukherjee; Carsten Kuenne; Jordan Pischimarov; Christian Krawitz; Julia Retey; Thomas Hartsch; Trinad Chakraborty; Torsten Hain
Journal:  Nucleic Acids Res       Date:  2011-01-29       Impact factor: 16.971
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