Literature DB >> 20058797

[The unique genome of two-chromosome grasses Zingeria and Colpodium, its origin, and evolution].

E S Kim, N L Bol'sheva, T E Samatadze, N N Nosov, I V Nosova, A V Zelenin, E O Punina, O V Muravenko, A V Rodionov.   

Abstract

Chromosome C-banding and two-color fluorescent in situ hybridization (FISH) were used to compare the chromosomes, to identify the chromosomal localization of the 45S and 5S rRNA genes, and to analyze the sequences of internal transcribed spacers 1 and 2 (ITS1 and ITS2) of the 45S rRNA genes in the genomes of grasses Zingeria biebersteiniana (2n = 4), Z. pisidica, Z. trichopoda (2n = 8), Colpodium versicolor (2n = 4), and Catabrosella variegata (syn. Colpodium variegatum) (2n = 10). Differences in C-banding pattern were observed for two Z. biebersteiniana accessions from different localities. Similar C-banding patterns of chromosomes 1 and 2 were demonstrated for the Z. pisidica and Z. biebersteininana karyotypes. Chromosome C banding and localization of the 45S and 5S rRNA genes on the chromosomes of the two Zingeria species confirmed the assumption that Z. pisidica is an allotetraploid with one of the subgenomes similar to the Z. biebersteiniana genome. ITS comparisons showed that the unique two-chromosome grasses (x = 2)-Z. biebersteiniana (2n = 4), Z. trichopoda (2n = 8), Z. pisidica (2n = 8), and C. versicolor (2n = 4), which were earlier assigned to different tribes of subtribes of the family Poaceae-represent two closely related genera, the genetic distance (p-distance) between their ITSs being only 1.2-4.4%. The Zingeria species and C. versicolor formed a common clade with Catabrosella araratica (2n = 42, x = 7) on a molecular phylogenetic tree. Thus, the karyotypes of Zingeria and Colpodium, which have the lowest known basic chromosome number (x = 2), proved to be monophyletic, rather than originating from different phylogenetic lineages.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 20058797

Source DB:  PubMed          Journal:  Genetika        ISSN: 0016-6758


  6 in total

1.  The intergenic spacer region of the rDNA in Haplopappus gracilis (Nutt.) Gray.

Authors:  M Ruffini Castiglione; M T Gelati; R Cremonini; M Frediani
Journal:  Protoplasma       Date:  2012-09-05       Impact factor: 3.356

2.  Are diversification rates and chromosome evolution in the temperate grasses (Pooideae) associated with major environmental changes in the Oligocene-Miocene?

Authors:  Manuel Pimentel; Marcial Escudero; Elvira Sahuquillo; Miguel Ángel Minaya; Pilar Catalán
Journal:  PeerJ       Date:  2017-09-22       Impact factor: 2.984

3.  Intragenomic Polymorphism of the ITS 1 Region of 35S rRNA Gene in the Group of Grasses with Two-Chromosome Species: Different Genome Composition in Closely Related Zingeria Species.

Authors:  Alexander V Rodionov; Alexander A Gnutikov; Nikolai N Nosov; Eduard M Machs; Yulia V Mikhaylova; Victoria S Shneyer; Elizaveta O Punina
Journal:  Plants (Basel)       Date:  2020-11-25

4.  Interstitial Arabidopsis-Type Telomeric Repeats in Asteraceae.

Authors:  Alexis J Maravilla; Marcela Rosato; Inés Álvarez; Gonzalo Nieto Feliner; Josep A Rosselló
Journal:  Plants (Basel)       Date:  2021-12-17

5.  Comparative and Phylogenetic Analysis Based on the Chloroplast Genome of Coleanthus subtilis (Tratt.) Seidel, a Protected Rare Species of Monotypic Genus.

Authors:  Jing Ren; Jing Tian; Hui Jiang; Xin-Xin Zhu; Fredrick Munyao Mutie; Vincent Okelo Wanga; Shi-Xiong Ding; Jia-Xin Yang; Xiang Dong; Ling-Ling Chen; Xiu-Zhen Cai; Guang-Wan Hu
Journal:  Front Plant Sci       Date:  2022-02-24       Impact factor: 5.753

6.  Karyotype structure and chromosome fragility in the grass Phleum echinatum Host.

Authors:  Aleksandra Grabowska-Joachimiak; Adam Kula; Dorota Gernand-Kliefoth; Andrzej J Joachimiak
Journal:  Protoplasma       Date:  2014-07-24       Impact factor: 3.356

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.