Literature DB >> 20057059

Cloning, recombinant production, crystallization and preliminary X-ray diffraction analysis of SDF2-like protein from Arabidopsis thaliana.

Jens Radzimanowski1, Stephanie Ravaud, Andrea Schott, Sabine Strahl, Irmgard Sinning.   

Abstract

The stromal-cell-derived factor 2-like protein of Arabidopsis thaliana (AtSDL) has been shown to be highly up-regulated in response to unfolded protein response (UPR) inducing reagents, suggesting that it plays a crucial role in the plant UPR pathway. AtSDL has been cloned, overexpressed, purified and crystallized using the vapour-diffusion method. Two crystal forms have been obtained under very similar conditions. The needle-shaped crystals did not diffract X-rays, while the other form diffracted to 1.95 A resolution using a synchrotron-radiation source and belonged to the hexagonal space group P6(1), with unit-cell parameters a = b = 96.1, c = 69.3 A.

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Year:  2009        PMID: 20057059      PMCID: PMC2805525          DOI: 10.1107/S1744309109042018

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  14 in total

1.  Genomic analysis of the unfolded protein response in Arabidopsis shows its connection to important cellular processes.

Authors:  Immaculada M Martínez; Maarten J Chrispeels
Journal:  Plant Cell       Date:  2003-02       Impact factor: 11.277

2.  Empirical analysis of transcriptional activity in the Arabidopsis genome.

Authors:  Kayoko Yamada; Jun Lim; Joseph M Dale; Huaming Chen; Paul Shinn; Curtis J Palm; Audrey M Southwick; Hank C Wu; Christopher Kim; Michelle Nguyen; Paul Pham; Rosa Cheuk; George Karlin-Newmann; Shirley X Liu; Bao Lam; Hitomi Sakano; Troy Wu; Guixia Yu; Molly Miranda; Hong L Quach; Matthew Tripp; Charlie H Chang; Jeong M Lee; Mitsue Toriumi; Marie M H Chan; Carolyn C Tang; Courtney S Onodera; Justine M Deng; Kenji Akiyama; Yasser Ansari; Takahiro Arakawa; Jenny Banh; Fumika Banno; Leah Bowser; Shelise Brooks; Piero Carninci; Qimin Chao; Nathan Choy; Akiko Enju; Andrew D Goldsmith; Mani Gurjal; Nancy F Hansen; Yoshihide Hayashizaki; Chanda Johnson-Hopson; Vickie W Hsuan; Kei Iida; Meagan Karnes; Shehnaz Khan; Eric Koesema; Junko Ishida; Paul X Jiang; Ted Jones; Jun Kawai; Asako Kamiya; Cristina Meyers; Maiko Nakajima; Mari Narusaka; Motoaki Seki; Tetsuya Sakurai; Masakazu Satou; Racquel Tamse; Maria Vaysberg; Erika K Wallender; Cecilia Wong; Yuki Yamamura; Shiaulou Yuan; Kazuo Shinozaki; Ronald W Davis; Athanasios Theologis; Joseph R Ecker
Journal:  Science       Date:  2003-10-31       Impact factor: 47.728

Review 3.  Endoplasmic reticulum quality control and the unfolded protein response: insights from plants.

Authors:  Alessandro Vitale; Rebecca S Boston
Journal:  Traffic       Date:  2008-06-28       Impact factor: 6.215

Review 4.  Signal integration in the endoplasmic reticulum unfolded protein response.

Authors:  David Ron; Peter Walter
Journal:  Nat Rev Mol Cell Biol       Date:  2007-07       Impact factor: 94.444

5.  A subset of chaperones and folding enzymes form multiprotein complexes in endoplasmic reticulum to bind nascent proteins.

Authors:  Laurent Meunier; Young-Kwang Usherwood; Kyung Tae Chung; Linda M Hendershot
Journal:  Mol Biol Cell       Date:  2002-12       Impact factor: 4.138

6.  Murine and human SDF2L1 is an endoplasmic reticulum stress-inducible gene and encodes a new member of the Pmt/rt protein family.

Authors:  S Fukuda; M Sumii; Y Masuda; M Takahashi; N Koike; J Teishima; H Yasumoto; T Itamoto; T Asahara; K Dohi; K Kamiya
Journal:  Biochem Biophys Res Commun       Date:  2001-01-12       Impact factor: 3.575

7.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

8.  Isolation and characterization of a novel secretory protein, stromal cell-derived factor-2 (SDF-2) using the signal sequence trap method.

Authors:  T Hamada; K Tashiro; H Tada; J Inazawa; M Shirozu; K Shibahara; T Nakamura; N Martina; T Nakano; T Honjo
Journal:  Gene       Date:  1996-10-17       Impact factor: 3.688

9.  Characterization of pancreatic ERj3p, a homolog of yeast DnaJ-like protein Scj1p.

Authors:  Christiane Bies; Robert Blum; Johanna Dudek; Wolfgang Nastainczyk; Simone Oberhauser; Martin Jung; Richard Zimmermann
Journal:  Biol Chem       Date:  2004-05       Impact factor: 3.915

10.  Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.

Authors:  Ivan Bosanac; Jean-René Alattia; Tapas K Mal; Jenny Chan; Susanna Talarico; Frances K Tong; Kit I Tong; Fumio Yoshikawa; Teiichi Furuichi; Miwako Iwai; Takayuki Michikawa; Katsuhiko Mikoshiba; Mitsuhiko Ikura
Journal:  Nature       Date:  2002-11-17       Impact factor: 49.962

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  3 in total

1.  Arabidopsis stromal-derived Factor2 (SDF2) is a crucial target of the unfolded protein response in the endoplasmic reticulum.

Authors:  Andrea Schott; Stéphanie Ravaud; Sabrina Keller; Jens Radzimanowski; Corrado Viotti; Stefan Hillmer; Irmgard Sinning; Sabine Strahl
Journal:  J Biol Chem       Date:  2010-04-08       Impact factor: 5.157

2.  Structural characterization of binding mode of smoking cessation drugs to nicotinic acetylcholine receptors through study of ligand complexes with acetylcholine-binding protein.

Authors:  Prakash Rucktooa; Claire A Haseler; René van Elk; August B Smit; Timothy Gallagher; Titia K Sixma
Journal:  J Biol Chem       Date:  2012-05-02       Impact factor: 5.157

3.  Functional implications of MIR domains in protein O-mannosylation.

Authors:  Antonella Chiapparino; Antonija Grbavac; Hendrik Ra Jonker; Yvonne Hackmann; Sofia Mortensen; Ewa Zatorska; Andrea Schott; Gunter Stier; Krishna Saxena; Klemens Wild; Harald Schwalbe; Sabine Strahl; Irmgard Sinning
Journal:  Elife       Date:  2020-12-24       Impact factor: 8.140

  3 in total

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