Literature DB >> 20057049

The X-ray structure of Salmonella typhimurium uridine nucleoside phosphorylase complexed with 2,2'-anhydrouridine, phosphate and potassium ions at 1.86 A resolution.

Alexander A Lashkov1, Nadezhda E Zhukhlistova, Azat H Gabdoulkhakov, Alexander A Shtil, Roman G Efremov, Christian Betzel, Al'bert M Mikhailov.   

Abstract

Uridine nucleoside phosphorylase is an important drug target for the development of anti-infective and antitumour agents. The X-ray crystal structure of Salmonella typhimurium uridine nucleoside phosphorylase (StUPh) complexed with its inhibitor 2,2'-anhydrouridine, phosphate and potassium ions has been solved and refined at 1.86 A resolution (R(cryst) = 17.6%, R(free) = 20.6%). The complex of human uridine phosphorylase I (HUPhI) with 2,2'-anhydrouridine was modelled using a computational approach. The model allowed the identification of atomic groups in 2,2'-anhydrouridine that might improve the interaction of future inhibitors with StUPh and HUPhI.

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Year:  2009        PMID: 20057049     DOI: 10.1107/S0907444909044175

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  7 in total

1.  Crystallization and preliminary X-ray study of Vibrio cholerae uridine phosphorylase in complex with 6-methyluracil.

Authors:  Igor I Prokofev; Alexander A Lashkov; Azat G Gabdulkhakov; Mariya V Dontsova; Tatyana A Seregina; Alexander S Mironov; Christian Betzel; Al'bert M Mikhailov
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2013-12-24       Impact factor: 1.056

2.  The crystal structure of Streptococcus pyogenes uridine phosphorylase reveals a distinct subfamily of nucleoside phosphorylases.

Authors:  Timothy H Tran; S Christoffersen; Paula W Allan; William B Parker; Jure Piskur; I Serra; M Terreni; Steven E Ealick
Journal:  Biochemistry       Date:  2011-07-08       Impact factor: 3.162

3.  Expression, purification, crystallization and preliminary X-ray structure analysis of Vibrio cholerae uridine phosphorylase in complex with thymidine.

Authors:  Alexander A Lashkov; Azat G Gabdulkhakov; Igor I Prokofev; Tatyana A Seregina; Sergey E Sotnichenko; Andrey V Lyashenko; Alexander A Shtil; Alexander S Mironov; Christian Betzel; Al'bert M Mikhailov
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-10-30

4.  A novel structural mechanism for redox regulation of uridine phosphorylase 2 activity.

Authors:  Tarmo P Roosild; Samantha Castronovo; Adelbert Villoso; Amy Ziemba; Giuseppe Pizzorno
Journal:  J Struct Biol       Date:  2011-08-10       Impact factor: 2.867

5.  Active site conformational dynamics in human uridine phosphorylase 1.

Authors:  Tarmo P Roosild; Samantha Castronovo
Journal:  PLoS One       Date:  2010-09-14       Impact factor: 3.240

6.  Decoding the similarities and differences among mycobacterial species.

Authors:  Sony Malhotra; Sundeep Chaitanya Vedithi; Tom L Blundell
Journal:  PLoS Negl Trop Dis       Date:  2017-08-30

Review 7.  Strained Conformations of Nucleosides in Active Sites of Nucleoside Phosphorylases.

Authors:  Irina A Il'icheva; Konstantin M Polyakov; Sergey N Mikhailov
Journal:  Biomolecules       Date:  2020-04-05
  7 in total

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