Literature DB >> 20054112

Structure of SurE protein from Aquifex aeolicus VF5 at 1.5 A resolution.

Svetlana V Antonyuk1, Mark J Ellis, Richard W Strange, Yoshitaka Bessho, Seiki Kuramitsu, Akeo Shinkai, Shigeyuki Yokoyama, S Samar Hasnain.   

Abstract

SurE is a stationary-phase survival protein found in bacteria, eukaryotes and archaea that exhibits a divalent-metal-ion-dependent phosphatase activity and acts as a nucleotidase and polyphosphate phosphohydrolase. The structure of the SurE protein from the hyperthermophile Aquifex aeolicus has been solved at 1.5 A resolution using molecular replacement with one dimer in the asymmetric unit and refined to an R factor of 15.6%. The crystal packing reveals that two dimers assemble to form a tetramer, although gel-filtration chromatography showed the presence of only a dimer in solution. The phosphatase active-site pocket was occupied by sulfate ions from the crystallization medium.

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Year:  2009        PMID： 20054112      PMCID： PMC2802864          DOI： 10.1107/S1744309109043814

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN： 1744-3091


  13 in total

Review 1.  Discovery of hyperthermophilic microorganisms.

Authors:  R Huber; K O Stetter
Journal:  Methods Enzymol       Date:  2001       Impact factor: 1.600

2.  Crystal structure and functional analysis of the SurE protein identify a novel phosphatase family.

Authors:  J Y Lee; J E Kwak; J Moon; S H Eom; E C Liong; J D Pedelacq; J Berendzen; S W Suh
Journal:  Nat Struct Biol       Date:  2001-09

3.  Resolution improvement from 'in situ annealing' of copper nitrite reductase crystals.

Authors:  Mark J Ellis; Svetlana Antonyuk; S Samar Hasnain
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-02-21

4.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

5.  Crystal structure of the stationary phase survival protein SurE with metal ion and AMP.

Authors:  Wakana Iwasaki; Kunio Miki
Journal:  J Mol Biol       Date:  2007-05-10       Impact factor: 5.469

6.  Growth-phase-dependent transcriptional regulation of the pcm and surE genes required for stationary-phase survival of Escherichia coli.

Authors:  Chuan Li; Pei-Ying Wu; Mingli Hsieh
Journal:  Microbiology (Reading)       Date:  1997-11       Impact factor: 2.777

7.  Structure of Thermotoga maritima stationary phase survival protein SurE: a novel acid phosphatase.

Authors:  R G Zhang; T Skarina; J E Katz; S Beasley; A Khachatryan; S Vyas; C H Arrowsmith; S Clarke; A Edwards; A Joachimiak; A Savchenko
Journal:  Structure       Date:  2001-11       Impact factor: 5.006

8.  General enzymatic screens identify three new nucleotidases in Escherichia coli. Biochemical characterization of SurE, YfbR, and YjjG.

Authors:  Michael Proudfoot; Ekaterina Kuznetsova; Greg Brown; Narayana N Rao; Masanari Kitagawa; Hirotada Mori; Alexei Savchenko; Alexander F Yakunin
Journal:  J Biol Chem       Date:  2004-10-15       Impact factor: 5.157

9.  Mutations in the Escherichia coli surE gene increase isoaspartyl accumulation in a strain lacking the pcm repair methyltransferase but suppress stress-survival phenotypes.

Authors:  J E Visick; J K Ichikawa; S Clarke
Journal:  FEMS Microbiol Lett       Date:  1998-10-01       Impact factor: 2.742

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971
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  3 in total

1.  Structural and functional insights into the stationary-phase survival protein SurE, an important virulence factor of Brucella abortus.

Authors:  K F Tarique; S A Abdul Rehman; S Devi; Priya Tomar; S Gourinath
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-04-22       Impact factor: 1.056

2.  Crystallization and preliminary X-ray analysis of stationary phase survival protein E (SurE) from Xylella fastidiosa in two crystal forms.

Authors:  Marcelo Augusto dos Reis; Antonio Marcos Saraiva; Marcelo Leite dos Santos; Anete Pereira de Souza; Ricardo Aparicio
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-03-28

3.  Dramatic structural changes resulting from the loss of a crucial hydrogen bond in the hinge region involved in C-terminal helix swapping in SurE: a survival protein from Salmonella typhimurium.

Authors:  Yamuna Kalyani Mathiharan; Anju Pappachan; H S Savithri; Mathur R N Murthy
Journal:  PLoS One       Date:  2013-02-07       Impact factor: 3.240
  3 in total

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