Literature DB >> 20054111

Structure of hypothetical Mo-cofactor biosynthesis protein B (ST2315) from Sulfolobus tokodaii.

Svetlana V Antonyuk1, Richard W Strange, Mark J Ellis, Yoshitaka Bessho, Seiki Kuramitsu, Akeo Shinkai, Shigeyuki Yokoyama, S Samar Hasnain.   

Abstract

The structure of a probable Mo-cofactor biosynthesis protein B from Sulfolobus tokodaii, belonging to space group P6(4)22 with unit-cell parameters a = b = 136.68, c = 210.52 A, was solved by molecular replacement to a resolution of 1.9 A and refined to an R factor and R(free) of 16.8% and 18.5%, respectively. The asymmetric unit contains a trimer, while the biologically significant oligomer is predicted to be a hexamer by size-exclusion chromatography. The subunit structure and fold of ST2315 are similar to those of other enzymes that are known to be involved in the molybdopterin- and molybdenum cofactor-biosynthesis pathways.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 20054111      PMCID: PMC2802863          DOI: 10.1107/S1744309109043772

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

1.  Automated protein model building combined with iterative structure refinement.

Authors:  A Perrakis; R Morris; V S Lamzin
Journal:  Nat Struct Biol       Date:  1999-05

2.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

3.  Crystal structure of the gephyrin-related molybdenum cofactor biosynthesis protein MogA from Escherichia coli.

Authors:  M T Liu; M M Wuebbens; K V Rajagopalan; H Schindelin
Journal:  J Biol Chem       Date:  2000-01-21       Impact factor: 5.157

Review 4.  Molybdenum cofactor biosynthesis and molybdenum enzymes.

Authors:  Günter Schwarz; Ralf R Mendel
Journal:  Annu Rev Plant Biol       Date:  2006       Impact factor: 26.379

5.  High-throughput crystallization-to-structure pipeline at RIKEN SPring-8 Center.

Authors:  Michihiro Sugahara; Yukuhiko Asada; Katsumi Shimizu; Hitoshi Yamamoto; Neratur K Lokanath; Hisashi Mizutani; Bagautdin Bagautdinov; Yoshinori Matsuura; Midori Taketa; Yuichi Kageyama; Naoko Ono; Yuko Morikawa; Yukiko Tanaka; Hiroki Shimada; Takanobu Nakamoto; Mitsuaki Sugahara; Masaki Yamamoto; Naoki Kunishima
Journal:  J Struct Funct Genomics       Date:  2008-08-02

6.  Dual requirement for gephyrin in glycine receptor clustering and molybdoenzyme activity.

Authors:  G Feng; H Tintrup; J Kirsch; M C Nichol; J Kuhse; H Betz; J R Sanes
Journal:  Science       Date:  1998-11-13       Impact factor: 47.728

7.  Crystal structures of human gephyrin and plant Cnx1 G domains: comparative analysis and functional implications.

Authors:  G Schwarz; N Schrader; R R Mendel; H J Hecht; H Schindelin
Journal:  J Mol Biol       Date:  2001-09-14       Impact factor: 5.469

8.  Structure of a putative molybdenum-cofactor biosynthesis protein C (MoaC) from Sulfolobus tokodaii (ST0472).

Authors:  Hiromi Yoshida; Mitsugu Yamada; Seiki Kuramitsu; Shigehiro Kamitori
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-06-11

9.  Structure of the molybdenum-cofactor biosynthesis protein MoaB of Escherichia coli.

Authors:  Gerd Bader; Mariola Gomez-Ortiz; Christoph Haussmann; Adelbert Bacher; Robert Huber; Markus Fischer
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-05-21

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

View more
  2 in total

1.  Crystal structures, dynamics and functional implications of molybdenum-cofactor biosynthesis protein MogA from two thermophilic organisms.

Authors:  Shankar Prasad Kanaujia; Jeyaraman Jeyakanthan; Akeo Shinkai; Seiki Kuramitsu; Shigeyuki Yokoyama; Kanagaraj Sekar
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-21

2.  Structural basis of thermal stability of the tungsten cofactor synthesis protein MoaB from Pyrococcus furiosus.

Authors:  Nastassia Havarushka; Katrin Fischer-Schrader; Tobias Lamkemeyer; Guenter Schwarz
Journal:  PLoS One       Date:  2014-01-20       Impact factor: 3.240

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.