Literature DB >> 20053375

Expression profiling in peripheral blood reveals signature for penetrance in DYT1 dystonia.

M Walter1, M Bonin, R Saunders Pullman, E M Valente, M Loi, M Gambarin, D Raymond, M Tinazzi, C Kamm, N Glöckle, S Poths, T Gasser, S B Bressman, C Klein, L J Ozelius, O Riess, K Grundmann.   

Abstract

DYT1 dystonia is an autosomal-dominantly inherited movement disorder, which is usually caused by a GAG deletion in the TOR1A gene. Due to the reduced penetrance of approximately 30-40%, the determination of the mutation in a subject is of limited use with regard to actual manifestation of symptoms. In the present study, we used Affymetrix oligonucleotide microarrays to analyze global gene expression in blood samples of 15 manifesting and 15 non-manifesting mutation carriers in order to identify a susceptibility profile beyond the GAG deletion which is associated with the manifestation of symptoms in DYT1 dystonia. We identified a genetic signature which distinguished between asymptomatic mutation carriers and symptomatic DYT1 patients with 86.7% sensitivity and 100% specificity. This genetic signature could correctly predict the disease state in an independent test set with a sensitivity of 87.5% and a specificity of 85.7%. Conclusively, this genetic signature might provide a possibility to distinguish DYT1 patients from asymptomatic mutation carriers. Copyright 2009 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20053375     DOI: 10.1016/j.nbd.2009.12.019

Source DB:  PubMed          Journal:  Neurobiol Dis        ISSN: 0969-9961            Impact factor:   5.996


  9 in total

1.  Structure of the Golgi apparatus is not influenced by a GAG deletion mutation in the dystonia-associated gene Tor1a.

Authors:  Sara B Mitchell; Sadahiro Iwabuchi; Hiroyuki Kawano; Tsun Ming Tom Yuen; Jin-Young Koh; K W David Ho; N Charles Harata
Journal:  PLoS One       Date:  2018-11-07       Impact factor: 3.240

2.  The c.-237_236GA>TT THAP1 sequence variant does not increase risk for primary dystonia.

Authors:  Jianfeng Xiao; Yu Zhao; Robert W Bastian; Joel S Perlmutter; Brad A Racette; Samer D Tabbal; Morvarid Karimi; Randal C Paniello; Zbigniew K Wszolek; Ryan J Uitti; Jay A Van Gerpen; David K Simon; Daniel Tarsy; Peter Hedera; Daniel D Truong; Karen P Frei; Andrew Blitzer; Monika Rudzińska; Ronald F Pfeiffer; Carrie Le; Mark S LeDoux
Journal:  Mov Disord       Date:  2011-03-02       Impact factor: 10.338

Review 3.  Molecular pathways in dystonia.

Authors:  D Cristopher Bragg; Ioanna A Armata; Flavia C Nery; Xandra O Breakefield; Nutan Sharma
Journal:  Neurobiol Dis       Date:  2010-12-04       Impact factor: 5.996

4.  Advances in the genetics of primary torsion dystonia.

Authors:  Enza Maria Valente; Alberto Albanese
Journal:  F1000 Biol Rep       Date:  2010-06-16

5.  The pathogenic human Torsin A in Drosophila activates the unfolded protein response and increases susceptibility to oxidative stress.

Authors:  A-Young Kim; Jong Bok Seo; Won-Tae Kim; Hee Jeong Choi; Soo-Young Kim; Genevieve Morrow; Robert M Tanguay; Hermann Steller; Young Ho Koh
Journal:  BMC Genomics       Date:  2015-04-23       Impact factor: 3.969

6.  Factors affecting the accuracy of a class prediction model in gene expression data.

Authors:  Putri W Novianti; Victor L Jong; Kit C B Roes; Marinus J C Eijkemans
Journal:  BMC Bioinformatics       Date:  2015-06-21       Impact factor: 3.169

7.  Genetic issues in the diagnosis of dystonias.

Authors:  Simona Petrucci; Enza Maria Valente
Journal:  Front Neurol       Date:  2013-04-10       Impact factor: 4.003

8.  Evaluation of gene expression classification studies: factors associated with classification performance.

Authors:  Putri W Novianti; Kit C B Roes; Marinus J C Eijkemans
Journal:  PLoS One       Date:  2014-04-25       Impact factor: 3.240

9.  BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm.

Authors:  Anna Papiez; Michal Marczyk; Joanna Polanska; Andrzej Polanski
Journal:  Bioinformatics       Date:  2019-06-01       Impact factor: 6.937

  9 in total

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