Literature DB >> 20049064

Carboxylic Acid to Thioamide Hydrogen Bonding.

Suchitra Datta1, David A Lightner.   

Abstract

The lactam groups of dipyrrinones avidly engage in amide-amide hydrogen bonding to form dimeric association complexes in nonpolar solvents (in CHCl(3), K(D) ~25,000 M(-1) at 22 degrees C). The corresponding thioamides (dipyrrinthiones), prepared from dipyrrinones by reaction with Lawesson's reagent, also form intermolecularly hydrogen-bonded dimers in nonpolar solvents, albeit with much weaker association constants (in CHCl(3), K(D) ~200 M(-1) at 22 degrees C). When a carboxylic acid group is tethered to C(9) of the dipyrrinone, as in the hexanoic acid of [6]-semirubin, tight intramolecular hydrogen bonding between the carboxylic acid group and the lactam moiety (intramolecular K(assoc) >>25,000) is found in CHCl(3) with no evidence of dimers. In contrast, the analogous dipyrrinthione, [6]-thiosemirubin, eschews intramolecular hydrogen bonds, as determined using NMR spectroscopy and vapor pressure osmometry, preferring to form intermolecularly hydrogen-bonded dimers of the thioamide-thioamide type.

Entities:  

Year:  2009        PMID: 20049064      PMCID: PMC2641023          DOI: 10.1016/j.tet.2008.09.082

Source DB:  PubMed          Journal:  Tetrahedron        ISSN: 0040-4020            Impact factor:   2.457


  4 in total

1.  The structure of bilirubin.

Authors:  R Bonnett; J E Davies; M B Hursthouse; G M Sheldrick
Journal:  Proc R Soc Lond B Biol Sci       Date:  1978-06-23

2.  Semirubin. A novel dipyrrinone strapped by intramolecular hydrogen bonds.

Authors:  M T Huggins; D A Lightner
Journal:  J Org Chem       Date:  2000-09-22       Impact factor: 4.354

3.  Hemirubin: An Intramolecularly Hydrogen-Bonded Analogue for One-Half Bilirubin.

Authors:  Qingqi Chen; David A. Lightner
Journal:  J Org Chem       Date:  1998-04-17       Impact factor: 4.354

4.  On the structure of bilirubin in solution. 13C[1H] heteronuclear Overhauser effect NMR analyses in aqueous buffer and organic solvents.

Authors:  D Nogales; D A Lightner
Journal:  J Biol Chem       Date:  1995-01-06       Impact factor: 5.157

  4 in total
  2 in total

1.  Hydrogen Bonding: HOC=O· · ·H-N vs. HOC=O· · ·H-C.

Authors:  Sanjeev K Dey; Suchitra Datta; David A Lightner
Journal:  Monatsh Chem       Date:  2014-10-01       Impact factor: 1.451

2.  Pyrazole, Imidazole, and Isoindolone Dipyrrinone Analogues: pH-Dependent Fluorophores That Red-Shift Emission Frequencies in a Basic Solution.

Authors:  Nicole Benson; Olabisi Suleiman; Samuel O Odoh; Zachary R Woydziak
Journal:  J Org Chem       Date:  2019-09-05       Impact factor: 4.354

  2 in total

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