Literature DB >> 20034111

Crystal structure of the MukB hinge domain with coiled-coil stretches and its functional implications.

Bonsu Ku1, Jae-Hong Lim, Ho-Chul Shin, Seong-Yeol Shin, Byung-Ha Oh.   

Abstract

The structural maintenance of chromosomes (SMC) family proteins are commonly found in the multiprotein complexes involved in chromosome organization, including chromosome condensation and sister chromatid cohesion. These proteins are characterized by forming a V-shaped homo- or heterodimeric structure with two long coiled-coil arms having two ATPase head domains at the distal ends. The hinge domain, located in the middle of the coiled coil, forms the dimer interface. In addition to being the dimerization module, SMC hinges appear to play other roles, including the gateway function for DNA entry into the cohesin complex. Herein, we report the homodimeric structure of the hinge domain of Escherichia coli MukB, which forms a prokaryotic condensin complex with two non-SMC subunits, MukE and MukF. In contrast with SMC hinge of Thermotoga maritima which has a sizable central hole at the dimer interface, MukB hinge forms a constricted dimer interface lacking a hole. Under our assay conditions, MukB hinge does not interact with DNA in accordance with the absence of a notable positively charged surface patch. The function of MukB hinge appears to be limited to dimerization of two copies of MukB molecules. 2009 Wiley-Liss, Inc.

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Year:  2010        PMID: 20034111     DOI: 10.1002/prot.22664

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  15 in total

1.  Mechanism of cohesin loading onto chromosomes: a conformational dynamics study.

Authors:  Ozge Kurkcuoglu; Paul A Bates
Journal:  Biophys J       Date:  2010-08-09       Impact factor: 4.033

2.  Escherichia coli condensin MukB stimulates topoisomerase IV activity by a direct physical interaction.

Authors:  Yinyin Li; Nichole K Stewart; Anthony J Berger; Seychelle Vos; Allyn J Schoeffler; James M Berger; Brian T Chait; Martha G Oakley
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

Review 3.  Towards a Unified Model of SMC Complex Function.

Authors:  Markus Hassler; Indra A Shaltiel; Christian H Haering
Journal:  Curr Biol       Date:  2018-11-05       Impact factor: 10.834

4.  Structural basis for the MukB-topoisomerase IV interaction and its functional implications in vivo.

Authors:  Seychelle M Vos; Nichole K Stewart; Martha G Oakley; James M Berger
Journal:  EMBO J       Date:  2013-10-04       Impact factor: 11.598

5.  The bacterial condensin MukB compacts DNA by sequestering supercoils and stabilizing topologically isolated loops.

Authors:  Rupesh Kumar; Małgorzata Grosbart; Pearl Nurse; Soon Bahng; Claire L Wyman; Kenneth J Marians
Journal:  J Biol Chem       Date:  2017-08-25       Impact factor: 5.157

Review 6.  MukBEF, a chromosomal organizer.

Authors:  Valentin V Rybenkov; Viridiana Herrera; Zoya M Petrushenko; Hang Zhao
Journal:  J Mol Microbiol Biotechnol       Date:  2015-02-17

7.  Structure and DNA binding activity of the mouse condensin hinge domain highlight common and diverse features of SMC proteins.

Authors:  Julia J Griese; Gregor Witte; Karl-Peter Hopfner
Journal:  Nucleic Acids Res       Date:  2010-02-05       Impact factor: 16.971

8.  Small Molecule Condensin Inhibitors.

Authors:  Hang Zhao; Zoya M Petrushenko; John K Walker; Jerome Baudry; Helen I Zgurskaya; Valentin V Rybenkov
Journal:  ACS Infect Dis       Date:  2018-10-22       Impact factor: 5.084

9.  Structural Basis for Dimer Formation of Human Condensin Structural Maintenance of Chromosome Proteins and Its Implications for Single-stranded DNA Recognition.

Authors:  Susumu Uchiyama; Kazuki Kawahara; Yuki Hosokawa; Shunsuke Fukakusa; Hiroya Oki; Shota Nakamura; Yukiko Kojima; Masanori Noda; Rie Takino; Yuya Miyahara; Takahiro Maruno; Yuji Kobayashi; Tadayasu Ohkubo; Kiichi Fukui
Journal:  J Biol Chem       Date:  2015-10-20       Impact factor: 5.157

10.  A positively charged channel within the Smc1/Smc3 hinge required for sister chromatid cohesion.

Authors:  Alexander Kurze; Katharine A Michie; Sarah E Dixon; Ajay Mishra; Takehiko Itoh; Syma Khalid; Lana Strmecki; Katsuhiko Shirahige; Christian H Haering; Jan Löwe; Kim Nasmyth
Journal:  EMBO J       Date:  2010-12-07       Impact factor: 11.598

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