Literature DB >> 20024516

Visualizing vertebrate embryos with episcopic 3D imaging techniques.

Stefan H Geyer1, Timothy J Mohun, Wolfgang J Weninger.   

Abstract

The creation of highly detailed, three-dimensional (3D) computer models is essential in order to understand the evolution and development of vertebrate embryos, and the pathogenesis of hereditary diseases. A still-increasing number of methods allow for generating digital volume data sets as the basis of virtual 3D computer models. This work aims to provide a brief overview about modern volume data-generation techniques, focusing on episcopic 3D imaging methods. The technical principles, advantages, and problems of episcopic 3D imaging are described. The strengths and weaknesses in its ability to visualize embryo anatomy and labeled gene product patterns, specifically, are discussed.

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Year:  2009        PMID: 20024516      PMCID: PMC5823209          DOI: 10.1100/tsw.2009.154

Source DB:  PubMed          Journal:  ScientificWorldJournal        ISSN: 1537-744X


  20 in total

1.  High-resolution Episcopic Microscopy (HREM) - Simple and Robust Protocols for Processing and Visualizing Organic Materials.

Authors:  Stefan H Geyer; Barbara Maurer-Gesek; Lukas F Reissig; Wolfgang J Weninger
Journal:  J Vis Exp       Date:  2017-07-07       Impact factor: 1.355

2.  High-resolution episcopic microscopy enables three-dimensional visualization of plant morphology and development.

Authors:  Yuval Cinnamon; Olga Genin; Yiftah Yitzhak; Joseph Riov; Israel David; Felix Shaya; Anat Izhaki
Journal:  Plant Direct       Date:  2019-11-06

3.  Three-dimensional virtual histology enabled through cytoplasm-specific X-ray stain for microscopic and nanoscopic computed tomography.

Authors:  Madleen Busse; Mark Müller; Melanie A Kimm; Simone Ferstl; Sebastian Allner; Klaus Achterhold; Julia Herzen; Franz Pfeiffer
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-20       Impact factor: 11.205

4.  The dermal arteries in the cutaneous angiosome of the descending genicular artery.

Authors:  Ines E Tinhofer; Maximilian Zaussinger; Stefan H Geyer; Stefan Meng; Lars-Peter Kamolz; Chieh-Han Tzou; Wolfgang J Weninger
Journal:  J Anat       Date:  2018-02-14       Impact factor: 2.610

5.  Using optical coherence tomography to rapidly phenotype and quantify congenital heart defects associated with prenatal alcohol exposure.

Authors:  Ganga Karunamuni; Shi Gu; Yong Qiu Doughman; Amanda I Noonan; Andrew M Rollins; Michael W Jenkins; Michiko Watanabe
Journal:  Dev Dyn       Date:  2015-03-13       Impact factor: 3.780

6.  Iodine-enhanced micro-computed tomography of atherosclerotic plaque morphology complements conventional histology.

Authors:  Trevor S Self; Anne-Marie Ginn-Hedman; Courtney N Kaulfus; Annie E Newell-Fugate; Brad R Weeks; Cristine L Heaps
Journal:  Atherosclerosis       Date:  2020-09-24       Impact factor: 5.162

7.  The interactive presentation of 3D information obtained from reconstructed datasets and 3D placement of single histological sections with the 3D portable document format.

Authors:  Bouke A de Boer; Alexandre T Soufan; Jaco Hagoort; Timothy J Mohun; Maurice J B van den Hoff; Arie Hasman; Frans P J M Voorbraak; Antoon F M Moorman; Jan M Ruijter
Journal:  Development       Date:  2011-01       Impact factor: 6.868

Review 8.  Imaging heart development using high-resolution episcopic microscopy.

Authors:  Timothy J Mohun; Wolfgang J Weninger
Journal:  Curr Opin Genet Dev       Date:  2011-09-04       Impact factor: 5.578

9.  Deciphering the Mechanisms of Developmental Disorders (DMDD): a new programme for phenotyping embryonic lethal mice.

Authors:  Timothy Mohun; David J Adams; Richard Baldock; Shoumo Bhattacharya; Andrew J Copp; Myriam Hemberger; Corinne Houart; Matt E Hurles; Elizabeth Robertson; James C Smith; Tom Weaver; Wolfgang Weninger
Journal:  Dis Model Mech       Date:  2013-03-18       Impact factor: 5.758

Review 10.  Capturing structure and function in an embryonic heart with biophotonic tools.

Authors:  Ganga H Karunamuni; Shi Gu; Matthew R Ford; Lindsy M Peterson; Pei Ma; Yves T Wang; Andrew M Rollins; Michael W Jenkins; Michiko Watanabe
Journal:  Front Physiol       Date:  2014-09-23       Impact factor: 4.566

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