Literature DB >> 20023817

Effects of co-solvents on peptide hydration water structure and dynamics.

Margaret E Johnson1, Cecile Malardier-Jugroot, Teresa Head-Gordon.   

Abstract

We evaluate the molecular response of hydration water as a function of temperature and proximity to the surface of the peptide N-acetyl-leucine-methylamide (NALMA) when in the presence of the kosmotrope co-solvent glycerol or the chaotrope co-solvent dimethyl sulfoxide (DMSO), using molecular dynamics simulation with a polarizable force field. These detailed microscopic studies complement established thermodynamic analysis on the role of co-solvents in shifting the equilibrium for proteins away from or towards the native folded state. We find that the structure of the water at the peptide interfaces reflects an increase in hydration number in the glycerol solution and a decrease in hydration numbers in the DMSO solution. While the water dynamics around NALMA in the presence of both co-solvents is slower than that observed with the water solvent alone, in the DMSO mixture we no longer measure a separation in water motion time scales at low temperatures as is seen in the pure water solvent, but rather one single relaxation time. In the glycerol, however, we do observe a separation of time scales at low temperatures, supporting the hypothesis that hydration water near a hydrophobic solute evolves on a separate time scale than the extensive hydrogen-bonding network of more bulk-like water. Our simulation studies highlight the differences in the two co-solvent solutions due to the relative frequency of water contacts with the hydrophobic vs. hydrophilic peptide surface, and direct water interactions with the co-solvents.

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Year:  2009        PMID: 20023817     DOI: 10.1039/b915888j

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  12 in total

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Authors:  V Conti Nibali; S Pezzotti; F Sebastiani; D R Galimberti; G Schwaab; M Heyden; M-P Gaigeot; M Havenith
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8.  Evidences for Cooperative Resonance-Assisted Hydrogen Bonds in Protein Secondary Structure Analogs.

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9.  Hydrophobic hydration of poly-N-isopropyl acrylamide: a matter of the mean energetic state of water.

Authors:  I Bischofberger; D C E Calzolari; P De Los Rios; I Jelezarov; V Trappe
Journal:  Sci Rep       Date:  2014-03-14       Impact factor: 4.379

10.  The reactivity and conformational control of cyclic tetrapeptides derived from aziridine-containing amino acids.

Authors:  Benjamin K W Chung; Christopher J White; Conor C G Scully; Andrei K Yudin
Journal:  Chem Sci       Date:  2016-06-30       Impact factor: 9.825

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