Literature DB >> 20023774

Microfluidic sample preparation: cell lysis and nucleic acid purification.

Jungkyu Kim1, Michael Johnson, Parker Hill, Bruce K Gale.   

Abstract

Due to the lack of development in the area of sample preparation, few complete lab-on-a-chip systems have appeared in recent years that can deal with raw samples. Cell lysis and nucleic acid extraction systems are sufficiently complex even before adding the complexity of an analysis system. In this review, a variety of microfluidic sample preparation methods are discussed and evaluated. Microsystems for cell lysis are discussed by grouping them into categories based on their lysis mechanisms: mechanical, chemical, thermal or electrical. We classify the nucleic acid purification techniques according to the mechanism that links nucleic acids to substrates: silica-based surface affinity, electrostatic interaction, nanoporous membrane filtration, and functionalized microparticles. The techniques for microfluidic cell lysis and nucleic acid purification are compared based on the ease of microfabrication and integration, and sample flexibility. These assessments can help us determine the appropriate sample preparation technique for generating a true lab-on-a-chip.

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Year:  2009        PMID: 20023774     DOI: 10.1039/b905844c

Source DB:  PubMed          Journal:  Integr Biol (Camb)        ISSN: 1757-9694            Impact factor:   2.192


  53 in total

Review 1.  Sample pretreatment and nucleic acid-based detection for fast diagnosis utilizing microfluidic systems.

Authors:  Jung-Hao Wang; Chih-Hung Wang; Gwo-Bin Lee
Journal:  Ann Biomed Eng       Date:  2011-12-07       Impact factor: 3.934

2.  Electroporation and lysis of marine microalga Karenia brevis for RNA extraction and amplification.

Authors:  M M Bahi; M-N Tsaloglou; M Mowlem; H Morgan
Journal:  J R Soc Interface       Date:  2010-11-17       Impact factor: 4.118

3.  Integrated electrical concentration and lysis of cells in a microfluidic chip.

Authors:  Christopher Church; Junjie Zhu; Guohui Huang; Tzuen-Rong Tzeng; Xiangchun Xuan
Journal:  Biomicrofluidics       Date:  2010-10-01       Impact factor: 2.800

4.  Microfluidic long DNA sample preparation from cells.

Authors:  Paridhi Agrawal; Kevin D Dorfman
Journal:  Lab Chip       Date:  2019-01-15       Impact factor: 6.799

5.  Tailorable integrated optofluidic filters for biomolecular detection.

Authors:  Philip Measor; Brian S Phillips; Aiqing Chen; Aaron R Hawkins; Holger Schmidt
Journal:  Lab Chip       Date:  2011-01-10       Impact factor: 6.799

6.  Microfluidic enrichment of bacteria coupled to contact-free lysis on a magnetic polymer surface for downstream molecular detection.

Authors:  Alison Burklund; James D Petryk; P Jack Hoopes; John X J Zhang
Journal:  Biomicrofluidics       Date:  2020-06-23       Impact factor: 2.800

7.  Microfluidic approaches for cell-based molecular diagnosis.

Authors:  Dong Jun Lee; John Mai; Tony Jun Huang
Journal:  Biomicrofluidics       Date:  2018-09-14       Impact factor: 2.800

8.  Selective nucleic acid removal via exclusion (SNARE): capturing mRNA and DNA from a single sample.

Authors:  Lindsay Strotman; Rachel O'Connell; Benjamin P Casavant; Scott M Berry; Jamie M Sperger; Joshua M Lang; David J Beebe
Journal:  Anal Chem       Date:  2013-09-26       Impact factor: 6.986

Review 9.  Advances and challenges in biosensor-based diagnosis of infectious diseases.

Authors:  Mandy L Y Sin; Kathleen E Mach; Pak Kin Wong; Joseph C Liao
Journal:  Expert Rev Mol Diagn       Date:  2014-02-13       Impact factor: 5.225

10.  Genomic DNA extraction from cells by electroporation on an integrated microfluidic platform.

Authors:  Tao Geng; Ning Bao; Nammalwar Sriranganathanw; Liwu Li; Chang Lu
Journal:  Anal Chem       Date:  2012-10-23       Impact factor: 6.986

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