Literature DB >> 20020779

Assessment of the reproducibility of random hexapeptide peptide library-based protein normalization.

Ravi C Dwivedi1, Oleg V Krokhin, John P Cortens, John A Wilkins.   

Abstract

The wide dynamic range of proteins in biological samples poses a challenge for the detection of low-abundance proteins. Recently, combinatorial hexapeptide peptide libraries have been suggested as an approach to normalization of proteins in such mixtures. We examined the reproducibility of a commercial hexapeptide ligand library for quantitative and comparative serum proteomic analysis. We also compared this technology with IgY-based affinity depletion.

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Year:  2010        PMID: 20020779     DOI: 10.1021/pr900608z

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  10 in total

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2.  Proteomic technologies for the discovery of type 1 diabetes biomarkers.

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3.  Discovery and validation of serum protein changes in type 1 diabetes patients using high throughput two dimensional liquid chromatography-mass spectrometry and immunoassays.

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Review 4.  Liquid-phase-based separation systems for depletion, prefractionation and enrichment of proteins in biological fluids and matrices for in-depth proteomics analysis--an update covering the period 2008-2011.

Authors:  Subhashini Selvaraju; Ziad El Rassi
Journal:  Electrophoresis       Date:  2011-11-28       Impact factor: 3.535

5.  High-pH reversed-phase chromatography with fraction concatenation for 2D proteomic analysis.

Authors:  Feng Yang; Yufeng Shen; David G Camp; Richard D Smith
Journal:  Expert Rev Proteomics       Date:  2012-04       Impact factor: 3.940

6.  Combined use of a solid-phase hexapeptide ligand library with liquid chromatography and two-dimensional difference gel electrophoresis for intact plasma proteomics.

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Journal:  Int J Proteomics       Date:  2011-09-08

7.  Comprehensive protein profiling of synovial fluid in osteoarthritis following protein equalization.

Authors:  M J Peffers; B McDermott; P D Clegg; C M Riggs
Journal:  Osteoarthritis Cartilage       Date:  2015-03-26       Impact factor: 6.576

8.  Proteomic analysis reveals age-related changes in tendon matrix composition, with age- and injury-specific matrix fragmentation.

Authors:  Mandy J Peffers; Chavaunne T Thorpe; John A Collins; Robin Eong; Timothy K J Wei; Hazel R C Screen; Peter D Clegg
Journal:  J Biol Chem       Date:  2014-07-30       Impact factor: 5.157

9.  Anatomical heterogeneity of tendon: Fascicular and interfascicular tendon compartments have distinct proteomic composition.

Authors:  Chavaunne T Thorpe; Mandy J Peffers; Deborah Simpson; Elizabeth Halliwell; Hazel R C Screen; Peter D Clegg
Journal:  Sci Rep       Date:  2016-02-04       Impact factor: 4.379

10.  iTRAQ-based proteomic profiling reveals different protein expression between normal skin and hypertrophic scar tissue.

Authors:  Jianglin Tan; Weifeng He; Gaoxing Luo; Jun Wu
Journal:  Burns Trauma       Date:  2015-08-27
  10 in total

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