Literature DB >> 20018961

Genomewide association study of leprosy.

Fu-Ren Zhang1, Wei Huang, Shu-Min Chen, Liang-Dan Sun, Hong Liu, Yi Li, Yong Cui, Xiao-Xiao Yan, Hai-Tao Yang, Rong-De Yang, Tong-Sheng Chu, Chi Zhang, Lin Zhang, Jian-Wen Han, Gong-Qi Yu, Cheng Quan, Yong-Xiang Yu, Zheng Zhang, Ben-Qing Shi, Lian-Hua Zhang, Hui Cheng, Chang-Yuan Wang, Yan Lin, Hou-Feng Zheng, Xi-An Fu, Xian-Bo Zuo, Qiang Wang, Heng Long, Yi-Ping Sun, Yi-Lin Cheng, Hong-Qing Tian, Fu-Sheng Zhou, Hua-Xu Liu, Wen-Sheng Lu, Su-Min He, Wen-Li Du, Min Shen, Qi-Yi Jin, Ying Wang, Hui-Qi Low, Tantoso Erwin, Ning-Han Yang, Jin-Yong Li, Xin Zhao, Yue-Lin Jiao, Li-Guo Mao, Gang Yin, Zhen-Xia Jiang, Xiao-Dong Wang, Jing-Ping Yu, Zong-Hou Hu, Cui-Hua Gong, Yu-Qiang Liu, Rui-Yu Liu, De-Min Wang, Dong Wei, Jin-Xian Liu, Wei-Kun Cao, Hong-Zhong Cao, Yong-Ping Li, Wei-Guo Yan, Shi-Yu Wei, Kui-Jun Wang, Martin L Hibberd, Sen Yang, Xue-Jun Zhang, Jian-Jun Liu.   

Abstract

BACKGROUND: The narrow host range of Mycobacterium leprae and the fact that it is refractory to growth in culture has limited research on and the biologic understanding of leprosy. Host genetic factors are thought to influence susceptibility to infection as well as disease progression.
METHODS: We performed a two-stage genomewide association study by genotyping 706 patients and 1225 controls using the Human610-Quad BeadChip (Illumina). We then tested three independent replication sets for an association between the presence of leprosy and 93 single-nucleotide polymorphisms (SNPs) that were most strongly associated with the disease in the genomewide association study. Together, these replication sets comprised 3254 patients and 5955 controls. We also carried out tests of heterogeneity of the associations (or lack thereof) between these 93 SNPs and disease, stratified according to clinical subtype (multibacillary vs. paucibacillary).
RESULTS: We observed a significant association (P<1.00x10(-10)) between SNPs in the genes CCDC122, C13orf31, NOD2, TNFSF15, HLA-DR, and RIPK2 and a trend toward an association (P=5.10x10(-5)) with a SNP in LRRK2. The associations between the SNPs in C13orf31, LRRK2, NOD2, and RIPK2 and multibacillary leprosy were stronger than the associations between these SNPs and paucibacillary leprosy.
CONCLUSIONS: Variants of genes in the NOD2-mediated signaling pathway (which regulates the innate immune response) are associated with susceptibility to infection with M. leprae. 2009 Massachusetts Medical Society

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Year:  2009        PMID: 20018961     DOI: 10.1056/NEJMoa0903753

Source DB:  PubMed          Journal:  N Engl J Med        ISSN: 0028-4793            Impact factor:   91.245


  298 in total

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