Literature DB >> 20018713

Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities.

Zhixi Tian1, Qian Qian, Qiaoquan Liu, Meixian Yan, Xinfang Liu, Changjie Yan, Guifu Liu, Zhenyu Gao, Shuzhu Tang, Dali Zeng, Yonghong Wang, Jianming Yu, Minghong Gu, Jiayang Li.   

Abstract

More than half of the world's population uses rice as a source of carbon intake every day. Improving grain quality is thus essential to rice consumers. The three main properties that determine rice eating and cooking quality--amylose content, gel consistency, and gelatinization temperature--correlate with one another, but the underlying mechanism of these properties remains unclear. Through an association analysis approach, we found that genes related to starch synthesis cooperate with each other to form a fine regulating network that controls the eating and cooking quality and defines the correlation among these three properties. Genetic transformation results verified the association findings and also suggested the possibility of developing elite cultivars through modification with selected major and/or minor starch synthesis-related genes.

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Year:  2009        PMID: 20018713      PMCID: PMC2793318          DOI: 10.1073/pnas.0912396106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Association mapping in structured populations.

Authors:  J K Pritchard; M Stephens; N A Rosenberg; P Donnelly
Journal:  Am J Hum Genet       Date:  2000-05-26       Impact factor: 11.025

2.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

Review 3.  Genome-wide association studies for common diseases and complex traits.

Authors:  Joel N Hirschhorn; Mark J Daly
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4.  Role of granule-bound starch synthase in determination of amylopectin structure and starch granule morphology in potato.

Authors:  Daniel C Fulton; Anne Edwards; Emma Pilling; Helen L Robinson; Brendan Fahy; Robert Seale; Lisa Kato; Athene M Donald; Peter Geigenberger; Cathie Martin; Alison M Smith
Journal:  J Biol Chem       Date:  2002-01-18       Impact factor: 5.157

5.  Molecular structure of three mutations at the maize sugary1 locus and their allele-specific phenotypic effects.

Authors:  J R Dinges; C Colleoni; A M Myers; M G James
Journal:  Plant Physiol       Date:  2001-03       Impact factor: 8.340

6.  The amylose content in rice endosperm is related to the post-transcriptional regulation of the waxy gene.

Authors:  Z Y Wang; F Q Zheng; G Z Shen; J P Gao; D P Snustad; M G Li; J L Zhang; M M Hong
Journal:  Plant J       Date:  1995-04       Impact factor: 6.417

Review 7.  Starch synthesis in the cereal endosperm.

Authors:  Martha G James; Kay Denyer; Alan M Myers
Journal:  Curr Opin Plant Biol       Date:  2003-06       Impact factor: 7.834

Review 8.  The complexities of starch biosynthesis in cereal endosperms.

Authors:  L Curtis Hannah; Martha James
Journal:  Curr Opin Biotechnol       Date:  2008-04-08       Impact factor: 9.740

9.  Allelic diversification at the wx locus in landraces of Asian rice.

Authors:  I Mikami; N Uwatoko; Y Ikeda; J Yamaguchi; H Y Hirano; Y Suzuki; Y Sano
Journal:  Theor Appl Genet       Date:  2008-02-28       Impact factor: 5.699

Review 10.  Towards a better understanding of the metabolic system for amylopectin biosynthesis in plants: rice endosperm as a model tissue.

Authors:  Yasunori Nakamura
Journal:  Plant Cell Physiol       Date:  2002-07       Impact factor: 4.927

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  144 in total

1.  Genome-wide association studies of 14 agronomic traits in rice landraces.

Authors:  Xuehui Huang; Xinghua Wei; Tao Sang; Qiang Zhao; Qi Feng; Yan Zhao; Canyang Li; Chuanrang Zhu; Tingting Lu; Zhiwu Zhang; Meng Li; Danlin Fan; Yunli Guo; Ahong Wang; Lu Wang; Liuwei Deng; Wenjun Li; Yiqi Lu; Qijun Weng; Kunyan Liu; Tao Huang; Taoying Zhou; Yufeng Jing; Wei Li; Zhang Lin; Edward S Buckler; Qian Qian; Qi-Fa Zhang; Jiayang Li; Bin Han
Journal:  Nat Genet       Date:  2010-10-24       Impact factor: 38.330

2.  Evaluation of salinity tolerance and analysis of allelic function of HvHKT1 and HvHKT2 in Tibetan wild barley.

Authors:  Long Qiu; Dezhi Wu; Shafaqat Ali; Shengguan Cai; Fei Dai; Xiaoli Jin; Feibo Wu; Guoping Zhang
Journal:  Theor Appl Genet       Date:  2010-10-28       Impact factor: 5.699

3.  Genetic analysis of the metabolome exemplified using a rice population.

Authors:  Liang Gong; Wei Chen; Yanqiang Gao; Xianqing Liu; Hongyan Zhang; Caiguo Xu; Sibin Yu; Qifa Zhang; Jie Luo
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-20       Impact factor: 11.205

4.  Global selection on sucrose synthase haplotypes during a century of wheat breeding.

Authors:  Jian Hou; Qiyan Jiang; Chenyang Hao; Yuquan Wang; Hongna Zhang; Xueyong Zhang
Journal:  Plant Physiol       Date:  2014-01-08       Impact factor: 8.340

5.  An analysis of the polymorphisms in a gene for being involved in drought tolerance in maize.

Authors:  Liang Li; Zhuanfang Hao; Xinhai Li; Chuanxiao Xie; Mingshun Li; Degui Zhang; Jianfeng Weng; Zhijun Su; Xiaoling Liang; Shihuang Zhang
Journal:  Genetica       Date:  2011-03-25       Impact factor: 1.082

Review 6.  AGPase: its role in crop productivity with emphasis on heat tolerance in cereals.

Authors:  Gautam Saripalli; Pushpendra Kumar Gupta
Journal:  Theor Appl Genet       Date:  2015-07-08       Impact factor: 5.699

7.  A novel GRAS transcription factor, ZmGRAS20, regulates starch biosynthesis in rice endosperm.

Authors:  Huilin Cai; Yulong Chen; Min Zhang; Ronghao Cai; Beijiu Cheng; Qing Ma; Yang Zhao
Journal:  Physiol Mol Biol Plants       Date:  2016-12-21

Review 8.  Crop resistant starch and genetic improvement: a review of recent advances.

Authors:  Jian Xia; Dong Zhu; Ruomei Wang; Yue Cui; Yueming Yan
Journal:  Theor Appl Genet       Date:  2018-10-29       Impact factor: 5.699

9.  Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice.

Authors:  Xiaojun Zhang; Jianfei Wang; Ji Huang; Hongxia Lan; Cailin Wang; Congfei Yin; Yunyu Wu; Haijuan Tang; Qian Qian; Jiayang Li; Hongsheng Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-12       Impact factor: 11.205

10.  Generation of new glutinous rice by CRISPR/Cas9-targeted mutagenesis of the Waxy gene in elite rice varieties.

Authors:  Jinshan Zhang; Hui Zhang; José Ramón Botella; Jian-Kang Zhu
Journal:  J Integr Plant Biol       Date:  2018-01-23       Impact factor: 7.061

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