Literature DB >> 20016154

Contribution of radiation hybrids to genome mapping in domestic animals.

T Faraut1, S de Givry, C Hitte, Y Lahbib-Mansais, M Morisson, D Milan, T Schiex, B Servin, A Vignal, F Galibert, M Yerle.   

Abstract

Radiation hybrid mapping has emerged in the end of the 1990 s as a successful and complementary approach to map genomes, essentially because of its ability to bridge the gaps between genetic and clone-based physical maps, but also using comparative mapping approaches, between 'gene-rich' and 'gene-poor' maps. Since its early development in human, radiation hybrid mapping played a pivotal role in the process of mapping animal genomes, especially mammalian ones. We review here all the different steps involved in radiation hybrid mapping from the constitution of panels to the construction of maps. A description of its contribution to whole genome maps with a special emphasis on domestic animals will also be presented. Finally, current applications of radiation hybrid mapping in the context of whole genome assemblies will be described. (c) 2009 S. Karger AG, Basel.

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Year:  2009        PMID: 20016154     DOI: 10.1159/000245904

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN: 1424-8581            Impact factor:   1.636


  7 in total

1.  Radiation hybrid QTL mapping of Tdes2 involved in the first meiotic division of wheat.

Authors:  F M Bassi; A Kumar; Q Zhang; E Paux; E Huttner; A Kilian; R Dizon; C Feuillet; S S Xu; S F Kianian
Journal:  Theor Appl Genet       Date:  2013-05-29       Impact factor: 5.699

2.  A duck RH panel and its potential for assisting NGS genome assembly.

Authors:  Man Rao; Mireille Morisson; Thomas Faraut; Suzanne Bardes; Katia Fève; Emmanuelle Labarthe; Valérie Fillon; Yinhua Huang; Ning Li; Alain Vignal
Journal:  BMC Genomics       Date:  2012-09-28       Impact factor: 3.969

3.  DNA repair and crossing over favor similar chromosome regions as discovered in radiation hybrid of Triticum.

Authors:  Ajay Kumar; Filippo M Bassi; Etienne Paux; Omar Al-Azzam; Monika Michalak de Jimenez; Anne M Denton; Yong Q Gu; Eric Huttner; Andrzej Kilian; Sachin Kumar; Aakash Goyal; Muhammad J Iqbal; Vijay K Tiwari; Munevver Dogramaci; Harindra S Balyan; Harcharan S Dhaliwal; Pushpendra K Gupta; Gursharn S Randhawa; Catherine Feuillet; Wojciech P Pawlowski; Shahryar F Kianian
Journal:  BMC Genomics       Date:  2012-07-24       Impact factor: 3.969

4.  Radiation hybrid maps of the D-genome of Aegilops tauschii and their application in sequence assembly of large and complex plant genomes.

Authors:  Ajay Kumar; Raed Seetan; Mohamed Mergoum; Vijay K Tiwari; Muhammad J Iqbal; Yi Wang; Omar Al-Azzam; Hana Šimková; Ming-Cheng Luo; Jan Dvorak; Yong Q Gu; Anne Denton; Andrzej Kilian; Gerard R Lazo; Shahryar F Kianian
Journal:  BMC Genomics       Date:  2015-10-16       Impact factor: 3.969

5.  Physical mapping resources for large plant genomes: radiation hybrids for wheat D-genome progenitor Aegilops tauschii.

Authors:  Ajay Kumar; Kristin Simons; Muhammad J Iqbal; Monika Michalak de Jiménez; Filippo M Bassi; Farhad Ghavami; Omar Al-Azzam; Thomas Drader; Yi Wang; Ming-Cheng Luo; Yong Q Gu; Anne Denton; Gerard R Lazo; Steven S Xu; Jan Dvorak; Penny M A Kianian; Shahryar F Kianian
Journal:  BMC Genomics       Date:  2012-11-05       Impact factor: 3.969

6.  Construction of two whole genome radiation hybrid panels for dromedary (Camelus dromedarius): 5000RAD and 15000RAD.

Authors:  Polina L Perelman; Rudolf Pichler; Anna Gaggl; Denis M Larkin; Terje Raudsepp; Fahad Alshanbari; Heather M Holl; Samantha A Brooks; Pamela A Burger; Kathiravan Periasamy
Journal:  Sci Rep       Date:  2018-01-31       Impact factor: 4.379

7.  High-resolution mapping of the pericentromeric region on wheat chromosome arm 5AS harbouring the Fusarium head blight resistance QTL Qfhs.ifa-5A.

Authors:  Maria Buerstmayr; Barbara Steiner; Christian Wagner; Petra Schwarz; Klaus Brugger; Delfina Barabaschi; Andrea Volante; Giampiero Valè; Luigi Cattivelli; Hermann Buerstmayr
Journal:  Plant Biotechnol J       Date:  2017-11-10       Impact factor: 9.803

  7 in total

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