Literature DB >> 20014234

Mycobacterial stress regulation: The Dps "twin sister" defense mechanism and structure-function relationship.

Rakhi Pait Chowdhury1, Ramachandran Saraswathi, Dipankar Chatterji.   

Abstract

In this work, we have tried to emphasize the connection between mycobacterial growth and regulation of gene expression. Utilization of multiple carbon sources and diauxic growth helps bacteria to regulate gene expression at an optimum level so that the inhospitable conditions encountered during nutrient depletion can be circumvented. These aspects will be discussed with respect to mycobacterial growth in subsequent sections. Identification and characterization of genes induced under such conditions is helpful to understand the physiology of the bacterium. Although it is necessary to compare the total expression profile of proteins as they transit from vegetative growth to stationary phase, at times a lot of insights can be deciphered from the expression pattern of one or two proteins. We have compared the protein expression and sigma factor selectivity of two such proteins in M. smegmatis to understand the differential regulation of genes playing diverse function in the same species. Some newer insights on the structure and function of one of the Dps proteins are also explained.

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Year:  2010        PMID: 20014234     DOI: 10.1002/iub.285

Source DB:  PubMed          Journal:  IUBMB Life        ISSN: 1521-6543            Impact factor:   3.885


  10 in total

1.  Rational disruption of the oligomerization of the mini-ferritin E. coli DPS through protein-protein interface mutation.

Authors:  Yu Zhang; Jing Fu; Sze Y Chee; Emmiline X W Ang; Brendan P Orner
Journal:  Protein Sci       Date:  2011-10-05       Impact factor: 6.725

2.  The multifunctional PE_PGRS11 protein from Mycobacterium tuberculosis plays a role in regulating resistance to oxidative stress.

Authors:  Rashmi Chaturvedi; Kushagra Bansal; Yeddula Narayana; Nisha Kapoor; Namineni Sukumar; Shambhuprasad Kotresh Togarsimalemath; Nagasuma Chandra; Saurabh Mishra; Parthasarathi Ajitkumar; Beenu Joshi; Vishwa Mohan Katoch; Shripad A Patil; Kithiganahalli N Balaji
Journal:  J Biol Chem       Date:  2010-06-17       Impact factor: 5.157

3.  The rLrp of Mycobacterium tuberculosis inhibits proinflammatory cytokine production and downregulates APC function in mouse macrophages via a TLR2-mediated PI3K/Akt pathway activation-dependent mechanism.

Authors:  Yuan Liu; Jia-Yun Li; Su-Ting Chen; Hai-Rong Huang; Hong Cai
Journal:  Cell Mol Immunol       Date:  2015-07-13       Impact factor: 11.530

4.  Ferritin structure from Mycobacterium tuberculosis: comparative study with homologues identifies extended C-terminus involved in ferroxidase activity.

Authors:  Garima Khare; Vibha Gupta; Prachi Nangpal; Rakesh K Gupta; Nicholas K Sauter; Anil K Tyagi
Journal:  PLoS One       Date:  2011-04-08       Impact factor: 3.240

5.  Unveiling the role of Dps in the organization of mycobacterial nucleoid.

Authors:  Payel Ghatak; Kajari Karmakar; Sanjay Kasetty; Dipankar Chatterji
Journal:  PLoS One       Date:  2011-01-24       Impact factor: 3.240

Review 6.  Self-assembly in the ferritin nano-cage protein superfamily.

Authors:  Yu Zhang; Brendan P Orner
Journal:  Int J Mol Sci       Date:  2011-08-22       Impact factor: 5.923

7.  The nucleoid protein Dps binds genomic DNA of Escherichia coli in a non-random manner.

Authors:  S S Antipov; M N Tutukina; E V Preobrazhenskaya; F A Kondrashov; M V Patrushev; S V Toshchakov; I Dominova; U S Shvyreva; V V Vrublevskaya; O S Morenkov; N A Sukharicheva; V V Panyukov; O N Ozoline
Journal:  PLoS One       Date:  2017-08-11       Impact factor: 3.240

Review 8.  Small Prokaryotic DNA-Binding Proteins Protect Genome Integrity throughout the Life Cycle.

Authors:  Katja Molan; Darja Žgur Bertok
Journal:  Int J Mol Sci       Date:  2022-04-04       Impact factor: 5.923

9.  The evolution of an osmotically inducible dps in the genus Streptomyces.

Authors:  Paul D Facey; Matthew D Hitchings; Jason S Williams; David O F Skibinski; Paul J Dyson; Ricardo Del Sol
Journal:  PLoS One       Date:  2013-04-01       Impact factor: 3.240

10.  Polymorphic Protective Dps-DNA Co-Crystals by Cryo Electron Tomography and Small Angle X-Ray Scattering.

Authors:  Roman Kamyshinsky; Yury Chesnokov; Liubov Dadinova; Andrey Mozhaev; Ivan Orlov; Maxim Petoukhov; Anton Orekhov; Eleonora Shtykova; Alexander Vasiliev
Journal:  Biomolecules       Date:  2019-12-26
  10 in total

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