Literature DB >> 20002136

Top-down control of microbial activity and biomass in an Arctic soil ecosystem.

Bethany Allen1, Dana Willner, Walter C Oechel, David Lipson.   

Abstract

Globally, soil microbes preside over vast carbon stores, and both microbial biomass and activity are known to be regulated by bottom-up controls, that is, limitation by nutrients and energy. However, there is evidence that grazing by protozoans exerts top-down controls on biomass. Here, we investigate top-down control by phage on soil microbes using an experimental site near Barrow, Alaska (71 degrees N, 157 degrees W) during the 2007 growing season. Soil measurements were taken from sites that covered a range of microtopographical features within a drained and thawed lake basin including high- and low-centred ice-wedge polygons to estimate the availability of carbon and nitrogen for microbes. Using both field and laboratory experiments, we successfully increased both microbial biomass and respiration by decreasing phage populations. The addition of carbon and nutrients to soils had no significant effects on biomass or respiration, indicating a lack of bottom-up controls. Additionally, we present the first use of tea extracts as a potent anti-phage agent in soils. Our results suggest that top-down controls, such as phage predation, are critical to regulation of microbial activities in Arctic soils.

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Year:  2009        PMID: 20002136     DOI: 10.1111/j.1462-2920.2009.02104.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  10 in total

1.  Genome sequence of temperate bacteriophage Psymv2 from Antarctic Dry Valley soil isolate Psychrobacter sp. MV2.

Authors:  Tracy L Meiring; I Marla Tuffin; Craig Cary; Don A Cowan
Journal:  Extremophiles       Date:  2012-07-04       Impact factor: 2.395

2.  Direct assessment of viral diversity in soils by random PCR amplification of polymorphic DNA.

Authors:  Sharath Srinivasiah; Jacqueline Lovett; Shawn Polson; Jaysheel Bhavsar; Dhritiman Ghosh; Krishnakali Roy; Jeffry J Fuhrmann; Mark Radosevich; K Eric Wommack
Journal:  Appl Environ Microbiol       Date:  2013-06-21       Impact factor: 4.792

3.  Metagenomic insights into anaerobic metabolism along an Arctic peat soil profile.

Authors:  David A Lipson; John Matthew Haggerty; Archana Srinivas; Theodore K Raab; Shashank Sathe; Elizabeth A Dinsdale
Journal:  PLoS One       Date:  2013-05-31       Impact factor: 3.240

4.  Host-associated and free-living phage communities differ profoundly in phylogenetic composition.

Authors:  J Gregory Caporaso; Rob Knight; Scott T Kelley
Journal:  PLoS One       Date:  2011-02-24       Impact factor: 3.240

Review 5.  Bacteria-phage coevolution as a driver of ecological and evolutionary processes in microbial communities.

Authors:  Britt Koskella; Michael A Brockhurst
Journal:  FEMS Microbiol Rev       Date:  2014-03-27       Impact factor: 16.408

6.  Archaeal and bacterial communities across a chronosequence of drained lake basins in Arctic Alaska.

Authors:  J Kao-Kniffin; B J Woodcroft; S M Carver; J G Bockheim; J Handelsman; G W Tyson; K M Hinkel; C W Mueller
Journal:  Sci Rep       Date:  2015-12-18       Impact factor: 4.379

7.  Active microbiome structure and its association with environmental factors and viruses at different aquatic sites of a high-altitude wetland.

Authors:  Yoanna Eissler; María-Jesús Gálvez; Cristina Dorador; Martha Hengst; Verónica Molina
Journal:  Microbiologyopen       Date:  2018-07-30       Impact factor: 3.139

Review 8.  Bacteriophages in Natural and Artificial Environments.

Authors:  Steven Batinovic; Flavia Wassef; Sarah A Knowler; Daniel T F Rice; Cassandra R Stanton; Jayson Rose; Joseph Tucci; Tadashi Nittami; Antony Vinh; Grant R Drummond; Christopher G Sobey; Hiu Tat Chan; Robert J Seviour; Steve Petrovski; Ashley E Franks
Journal:  Pathogens       Date:  2019-07-12

9.  Microbial competition in polar soils: a review of an understudied but potentially important control on productivity.

Authors:  Terrence H Bell; Katrina L Callender; Lyle G Whyte; Charles W Greer
Journal:  Biology (Basel)       Date:  2013-03-27

10.  Improving Phage-Biofilm In Vitro Experimentation.

Authors:  Stephen T Abedon; Katarzyna M Danis-Wlodarczyk; Daniel J Wozniak; Matthew B Sullivan
Journal:  Viruses       Date:  2021-06-19       Impact factor: 5.048

  10 in total

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