Literature DB >> 19995580

Improved detection of microbial DNA after bead-beating before DNA isolation.

Richard de Boer1, Remco Peters, Sonja Gierveld, Tim Schuurman, Mirjam Kooistra-Smid, Paul Savelkoul.   

Abstract

Detection of microbial DNA in clinical samples by real-time PCR requires a universal extraction method with equally efficient lysis of cell walls of all possible microorganisms. We demonstrated that physical disruption by bead-beating with 0.1mm beads in combination with MagNA Pure DNA III extraction enhances microbial lysis of diverse Gram-positive microorganisms and may be used to optimize DNA extraction protocols in routine clinical diagnostics. Copyright 2009 Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19995580     DOI: 10.1016/j.mimet.2009.11.009

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  31 in total

1.  Development and Evaluation of a Novel Real-Time PCR for Pan-Dermatophyte Detection in Nail Specimens.

Authors:  Jie Gong; Menglong Ran; Xiaowen Wang; Zhe Wan; Ruoyu Li
Journal:  Mycopathologia       Date:  2015-09-28       Impact factor: 2.574

2.  Mechanical disruption of lysis-resistant bacterial cells by use of a miniature, low-power, disposable device.

Authors:  Peter E Vandeventer; Kris M Weigel; Jose Salazar; Barbara Erwin; Bruce Irvine; Robert Doebler; Ali Nadim; Gerard A Cangelosi; Angelika Niemz
Journal:  J Clin Microbiol       Date:  2011-05-04       Impact factor: 5.948

3.  Increasing Reproducibility in Oral Microbiome Research.

Authors:  Divya Gopinath; Rohit Kunnath Menon
Journal:  Methods Mol Biol       Date:  2021

4.  Variability in the Pre-Analytical Stages Influences Microbiome Laboratory Analyses.

Authors:  Aditi Kumar; Kristin Gravdal; Jonathan P Segal; Helen Steed; Matthew J Brookes; Hafid O Al-Hassi
Journal:  Genes (Basel)       Date:  2022-06-15       Impact factor: 4.141

5.  The cervical mucus plug inhibits, but does not block, the passage of ascending bacteria from the vagina during pregnancy.

Authors:  Lea K Hansen; Naja Becher; Sara Bastholm; Julie Glavind; Mette Ramsing; Chong J Kim; Roberto Romero; Jørgen S Jensen; Niels Uldbjerg
Journal:  Acta Obstet Gynecol Scand       Date:  2013-11-25       Impact factor: 3.636

6.  Improved detection of bifidobacteria with optimised 16S rRNA-gene based pyrosequencing.

Authors:  Kathleen Sim; Michael J Cox; Harm Wopereis; Rocio Martin; Jan Knol; Ming-Shi Li; William O C M Cookson; Miriam F Moffatt; J Simon Kroll
Journal:  PLoS One       Date:  2012-03-28       Impact factor: 3.240

7.  Comparison of DNA extraction methods for microbial community profiling with an application to pediatric bronchoalveolar lavage samples.

Authors:  Dana Willner; Joshua Daly; David Whiley; Keith Grimwood; Claire E Wainwright; Philip Hugenholtz
Journal:  PLoS One       Date:  2012-04-13       Impact factor: 3.240

8.  A straightforward and efficient analytical pipeline for metaproteome characterization.

Authors:  Alessandro Tanca; Antonio Palomba; Salvatore Pisanu; Massimo Deligios; Cristina Fraumene; Valeria Manghina; Daniela Pagnozzi; Maria Filippa Addis; Sergio Uzzau
Journal:  Microbiome       Date:  2014-12-10       Impact factor: 14.650

9.  Human milk metagenome: a functional capacity analysis.

Authors:  Tonya L Ward; Sergey Hosid; Ilya Ioshikhes; Illimar Altosaar
Journal:  BMC Microbiol       Date:  2013-05-25       Impact factor: 3.605

10.  Optimized bacterial DNA isolation method for microbiome analysis of human tissues.

Authors:  Carlijn E Bruggeling; Daniel R Garza; Soumia Achouiti; Wouter Mes; Bas E Dutilh; Annemarie Boleij
Journal:  Microbiologyopen       Date:  2021-06       Impact factor: 3.139

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.