Literature DB >> 19969385

Acquisition of prokaryotic genes by fungal genomes.

Marina Marcet-Houben1, Toni Gabaldón.   

Abstract

The relevance of horizontal gene transfer (HGT) in eukaryotes is a matter of debate. Recent analyses have shown clear examples in some species such as Candida parapsilosis, but broader surveys are lacking. To assess the impact of HGT in the fungal kingdom, we searched for prokaryotic-derived HGTs in 60 fully sequenced genomes. Using strict phylogenomic criteria, we detected 713 transferred genes. HGT affected most fungal clades, with particularly high rates in Pezizomycotina. Transferred genes included bacterial arsenite reductase, catalase, different racemases and peptidoglycan metabolism enzymes. Our results suggest an important role for HGT in fungal evolution. 2009 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 19969385     DOI: 10.1016/j.tig.2009.11.007

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  114 in total

Review 1.  Bacterial-fungal interactions: hyphens between agricultural, clinical, environmental, and food microbiologists.

Authors:  P Frey-Klett; P Burlinson; A Deveau; M Barret; M Tarkka; A Sarniguet
Journal:  Microbiol Mol Biol Rev       Date:  2011-12       Impact factor: 11.056

Review 2.  The ring of life hypothesis for eukaryote origins is supported by multiple kinds of data.

Authors:  James McInerney; Davide Pisani; Mary J O'Connell
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-09-26       Impact factor: 6.237

3.  Repeated horizontal gene transfer of GALactose metabolism genes violates Dollo's law of irreversible loss.

Authors:  Max A B Haase; Jacek Kominek; Dana A Opulente; Xing-Xing Shen; Abigail L LaBella; Xiaofan Zhou; Jeremy DeVirgilio; Amanda Beth Hulfachor; Cletus P Kurtzman; Antonis Rokas; Chris Todd Hittinger
Journal:  Genetics       Date:  2021-02-09       Impact factor: 4.562

4.  Multilayered horizontal operon transfers from bacteria reconstruct a thiamine salvage pathway in yeasts.

Authors:  Carla Gonçalves; Paula Gonçalves
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-14       Impact factor: 11.205

5.  Rampant horizontal transfer of SPIN transposons in squamate reptiles.

Authors:  Clément Gilbert; Sharon S Hernandez; Jaime Flores-Benabib; Eric N Smith; Cédric Feschotte
Journal:  Mol Biol Evol       Date:  2011-07-18       Impact factor: 16.240

6.  Horizontal Gene Transfer as an Indispensable Driver for Evolution of Neocallimastigomycota into a Distinct Gut-Dwelling Fungal Lineage.

Authors:  Chelsea L Murphy; Noha H Youssef; Radwa A Hanafy; M B Couger; Jason E Stajich; Yan Wang; Kristina Baker; Sumit S Dagar; Gareth W Griffith; Ibrahim F Farag; T M Callaghan; Mostafa S Elshahed
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

7.  Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life.

Authors:  Guy Leonard; Thomas A Richards
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-10       Impact factor: 11.205

8.  Functional eukaryotic nuclear localization signals are widespread in terminal proteins of bacteriophages.

Authors:  Modesto Redrejo-Rodríguez; Daniel Muñoz-Espín; Isabel Holguera; Mario Mencía; Margarita Salas
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

9.  Two origins for the gene encoding alpha-isopropylmalate synthase in fungi.

Authors:  Erica M Larson; Alexander Idnurm
Journal:  PLoS One       Date:  2010-07-15       Impact factor: 3.240

10.  Taming of the shrewd: novel eukaryotic genes from RNA viruses.

Authors:  Eugene V Koonin
Journal:  BMC Biol       Date:  2010-01-12       Impact factor: 7.431

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