Literature DB >> 19963255

Serum biomarkers of renal cell carcinoma assessed using a protein profiling approach based on ClinProt technique.

Clizia Chinello1, Erica Gianazza, Italo Zoppis, Veronica Mainini, Carmen Galbusera, Stefano Picozzi, Francesco Rocco, Giacomo Galasso, Silvano Bosari, Stefano Ferrero, Roberto Perego, Francesca Raimondo, Cristina Bianchi, Marina Pitto, Stefano Signorini, Paolo Brambilla, Paolo Mocarelli, Marzia Galli Kienle, Fulvio Magni.   

Abstract

OBJECTIVES: To investigate the possibility of using the ClinProt technique to find serum cancer related diagnostic markers that are able to better discriminate healthy subjects from patients affected by renal cell carcinoma (ccRCC). Renal cell carcinoma is the most common malignancy of the kidney. Biomarkers for early detection, prognosis, follow-up, and differential diagnosis of ccRCC from benign renal lesions are needed in daily clinical practice when imaging is not helpful.
METHODS: Serum of 29 healthy subjects and 33 ccRCC patients was analyzed by the ClinProt/MALDI-ToF technique.
RESULTS: A cluster of 3 peptides (A = m/z 1083 +/- 8 Da, B = m/z 1445 +/- 8 Da and C = m/z 6879 +/- 8 Da) was able to discriminate patients from control subjects. Cross-validation analysis using the whole casistic showed 88% and 96% of sensitivity and specificity, respectively. Moreover, the cluster showed 100% sensitivity for the identification of patients at pT2 (n = 5) and pT3 (n = 8) and 85% for pT1 patients (n = 20). The intensity of peaks A and C continuously decreased from pT1 to pT3, whereas peak B increased in pT1 and pT2.
CONCLUSIONS: These results may be useful to set up new diagnostic or prognostic tools. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19963255     DOI: 10.1016/j.urology.2009.09.050

Source DB:  PubMed          Journal:  Urology        ISSN: 0090-4295            Impact factor:   2.649


  12 in total

Review 1.  Biomarkers discovery by peptide and protein profiling in biological fluids based on functionalized magnetic beads purification and mass spectrometry.

Authors:  Fulvio Magni; Yuri E M Van Der Burgt; Clizia Chinello; Veronica Mainini; Erica Gianazza; Valeria Squeo; André M Deelder; Marzia Galli Kienle
Journal:  Blood Transfus       Date:  2010-06       Impact factor: 3.443

2.  Analysis of synovial fluid in knee joint of osteoarthritis:5 proteome patterns of joint inflammation based on matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.

Authors:  Xiaohua Pan; Liling Huang; Jiakai Chen; Yong Dai; Xiaofen Chen
Journal:  Int Orthop       Date:  2011-04-21       Impact factor: 3.075

3.  Imaging the clear cell renal cell carcinoma proteome.

Authors:  Todd M Morgan; Erin H Seeley; Oluwole Fadare; Richard M Caprioli; Peter E Clark
Journal:  J Urol       Date:  2012-09-23       Impact factor: 7.450

4.  Improved classification of breast cancer peptide and protein profiles by combining two serum workup procedures.

Authors:  Berit Velstra; Yuri E M van der Burgt; Bart J Mertens; Wilma E Mesker; André M Deelder; Rob A E M Tollenaar
Journal:  J Cancer Res Clin Oncol       Date:  2012-07-05       Impact factor: 4.553

5.  Serum peptidome patterns of breast cancer based on magnetic bead separation and mass spectrometry analysis.

Authors:  Nai-Jun Fan; Chun-Fang Gao; Guang Zhao; Xiu-Li Wang; Qing-Yin Liu
Journal:  Diagn Pathol       Date:  2012-04-20       Impact factor: 2.644

Review 6.  The proteomics big challenge for biomarkers and new drug-targets discovery.

Authors:  Rocco Savino; Sergio Paduano; Mariaimmacolata Preianò; Rosa Terracciano
Journal:  Int J Mol Sci       Date:  2012-10-29       Impact factor: 5.923

7.  Availability of MudPIT data for classification of biological samples.

Authors:  Dario Di Silvestre; Italo Zoppis; Francesca Brambilla; Valeria Bellettato; Giancarlo Mauri; Pierluigi Mauri
Journal:  J Clin Bioinforma       Date:  2013-01-14

8.  Serum peptidome patterns of colorectal cancer based on magnetic bead separation and MALDI-TOF mass spectrometry analysis.

Authors:  Nai-Jun Fan; Chun-Fang Gao; Xiu-Li Wang; Guang Zhao; Qing-Yin Liu; Yuan-Yao Zhang; Bao-Guo Cheng
Journal:  J Biomed Biotechnol       Date:  2012-10-03

9.  Identification of kininogen-1 as a serum biomarker for the early detection of advanced colorectal adenoma and colorectal cancer.

Authors:  Jing Wang; Xinying Wang; Shiyong Lin; Chudi Chen; Congrong Wang; Qunying Ma; Bo Jiang
Journal:  PLoS One       Date:  2013-07-23       Impact factor: 3.240

10.  Urinary signatures of Renal Cell Carcinoma investigated by peptidomic approaches.

Authors:  Clizia Chinello; Marta Cazzaniga; Gabriele De Sio; Andrew James Smith; Erica Gianazza; Angelica Grasso; Francesco Rocco; Stefano Signorini; Marco Grasso; Silvano Bosari; Italo Zoppis; Mohammed Dakna; Yuri E M van der Burgt; Giancarlo Mauri; Fulvio Magni
Journal:  PLoS One       Date:  2014-09-09       Impact factor: 3.240

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